RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 RGSL1A5PLK6 1076 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 CASQ2O14958 399 aaPredicted RBP11.09□□□□□ -0.63
BEST1-201ENST00000378043 VAPBO95292 243 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 IGLV3-25P01717 112 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 APOA4P06727 396 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 THP07101 528 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 NUDT2P50583 147 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 IRX1P78414 480 aaPredicted RBP11.09□□□□□ -0.63
BEST1-201ENST00000378043 MORN1Q5T089 497 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 SEL1L3Q68CR1 1132 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 ACAD11Q709F0 780 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 TMC7Q7Z402 723 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 UNKQ9C0B0 810 aaKnown RBP11.09□□□□□ -0.63
BEST1-201ENST00000378043 SIK2Q9H0K1 926 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 NDFIP2Q9NV92 336 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 SLC38A7Q9NVC3 462 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 TMLHEQ9NVH6 421 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 PDP2Q9P2J9 529 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 SLC2A6Q9UGQ3 507 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 G3BP2Q9UN86 482 aaKnown RBP11.09□□□□□ -0.63
BEST1-201ENST00000378043 LAMA3Q16787 3333 aa11.09□□□□□ -0.63
BEST1-201ENST00000378043 NLRC5Q86WI3 1866 aa11.08□□□□□ -0.63
BEST1-201ENST00000378043 ARL5CA6NH57 179 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 CASTOR2A6NHX0 329 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 DFFAO00273 331 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 AHCYL1O43865 530 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 MAFKO60675 156 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 DDHD2O94830 711 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 THRAP10827 490 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 GNAT1P11488 350 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 BDNFP23560 247 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 PGFP49763 221 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 ZNF135P52742 658 aaPredicted RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 SLC12A1Q13621 1099 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 PCID2Q5JVF3 399 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 RWDD4Q6NW29 188 aaKnown RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 LINC00523Q86TU6 105 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 DSELQ8IZU8 1212 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 CPSF7Q8N684 471 aaKnown RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 IPMKQ8NFU5 416 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 SCAMP5Q8TAC9 235 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 SREK1Q8WXA9 508 aaKnown RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 NXNL1Q96CM4 212 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 KLHL4Q9C0H6 718 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 OSBPL2Q9H1P3 480 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 XPR1Q9UBH6 696 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 STK39Q9UEW8 545 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 ST3GAL5Q9UNP4 418 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 TMEM233B4DJY2 109 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 CCNCP24863 283 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 SCNN1GP51170 649 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 THOP1P52888 689 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 ZNF33AQ06730 810 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 PRKAA1Q13131 559 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 PRPSAP1Q14558 356 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 UPP1Q16831 310 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 LRRC8EQ6NSJ5 796 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 FAM171BQ6P995 826 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 AGMOQ6ZNB7 445 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 TRAPPC9Q96Q05 1148 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 FCRL5Q96RD9 977 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 PARK7Q99497 189 aaKnown RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 IL12RB2Q99665 862 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 OMDQ99983 421 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 TBL1YQ9BQ87 522 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 PAPOLBQ9NRJ5 636 aaKnown RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 NSMCE4AQ9NXX6 385 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 MID2Q9UJV3 735 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 ACOT9Q9Y305 439 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 UQCRBP14927 111 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 VCLP18206 1134 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 DNAJB2P25686 324 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 ADRA1AP35348 466 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 MSX2P35548 267 aaPredicted RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 DPP6P42658 865 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 CPT1AP50416 773 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 PURAQ00577 322 aaKnown RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 MAP2K5Q13163 448 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 TRIP10Q15642 601 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 PAN2Q504Q3 1202 aaKnown RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 PIGGQ5H8A4 983 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 ZNF280DQ6N043 979 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 LRRTM3Q86VH5 581 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 KDM1BQ8NB78 822 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 KYQ8NBH2 561 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 RP9Q8TA86 221 aaKnown RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 IRGQQ8WZA9 623 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 RNF34Q969K3 372 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 SCYL1Q96KG9 808 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 MARK4Q96L34 752 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 TMEM209Q96SK2 561 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 ARHGEF38Q9NXL2 777 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 CPA4Q9UI42 421 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 TBC1D30Q9Y2I9 924 aa11.08□□□□□ -0.64
BEST1-201ENST00000378043 AAR2Q9Y312 384 aaKnown RBP11.08□□□□□ -0.64
BEST1-201ENST00000378043 MIA3Q5JRA6 1907 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 PATJQ8NI35 1801 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 AP3B1O00203 1094 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 AURKAO14965 403 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 PIM1P11309 404 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms