RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 SH3YL1Q96HL8 342 aaPredicted RBP15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 MAGEB5Q9BZ81 275 aa15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 POLR3FQ9H1D9 316 aaPredicted RBP15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 SMARCAD1Q9H4L7 1026 aa15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 FANCEQ9HB96 536 aa15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 PDLIM7Q9NR12 457 aa15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 ZNF277Q9NRM2 450 aaPredicted RBP15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 SCAF8Q9UPN6 1271 aaKnown RBP15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 DGKBQ9Y6T7 804 aa15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 PSME4Q14997 1843 aa15.88■□□□□ 0.13
CSNK1A1-202ENST00000377843 A0A096LPK6 155 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 TPST1O60507 370 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 GRAP2O75791 330 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 ADSLP30566 484 aaPredicted RBP15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 NEK2P51955 445 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 AGAP7PQ5VUJ5 663 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 C14orf80Q86SX3 495 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 TMEM151AQ8N4L1 468 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 GLT1D1Q96MS3 346 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 MSTO1Q9BUK6 570 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 SCUBE2Q9NQ36 999 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 SYBUQ9NX95 663 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 UTP6Q9NYH9 597 aaKnown RBP15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 ANKRD34BA5PLL1 514 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 CLOCKO15516 846 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 CPNE6O95741 557 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 HSPA1AP0DMV8 641 aaKnown RBP15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 HSPA1BP0DMV9 641 aaKnown RBP15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 PTPN2P17706 415 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 GP5P40197 560 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 NAGLUP54802 743 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 CSE1LP55060 971 aaKnown RBP15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 TPTEP56180 551 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 RPS6P62753 249 aaKnown RBP15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 TRAP1Q12931 704 aaKnown RBP15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 BFSP2Q13515 415 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 OLIG2Q13516 323 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 AQP6Q13520 282 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 SEMA5AQ13591 1074 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 SPCS2Q15005 226 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 PLCL1Q15111 1095 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 REP15Q6BDI9 236 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 LRRC8EQ6NSJ5 796 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 FCRL3Q96P31 734 aaPredicted RBP15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 ZNF347Q96SE7 839 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 AGAP2Q99490 1192 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 NIF3L1Q9GZT8 377 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 NMRAL1Q9HBL8 299 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 PCDH12Q9NPG4 1184 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 SNX9Q9Y5X1 595 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 NRXN2Q9P2S2 1712 aa15.87■□□□□ 0.13
CSNK1A1-202ENST00000377843 KPNA7A9QM74 516 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 RAD17O75943 681 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 NCAM1P13591 858 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 TGM2P21980 687 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 TGM1P22735 817 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 ASPAP45381 313 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 NKX2-5P52952 324 aaPredicted RBP15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 TMBIM6P55061 237 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 FAM102AQ5T9C2 384 aaPredicted RBP15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 STYK1Q6J9G0 422 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 FSTL4Q6MZW2 842 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 MCF2L2Q86YR7 1114 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 CAMK1DQ8IU85 385 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 SGCDQ92629 289 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 ISL2Q96A47 359 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 PBXIP1Q96AQ6 731 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 ASNSD1Q9NWL6 643 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 FBXO40Q9UH90 709 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 PSME2Q9UL46 239 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 AP4E1Q9UPM8 1137 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 RGPD3A6NKT7 1758 aaPredicted RBP15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 RGPD4Q7Z3J3 1758 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 YDJCA8MPS7 323 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 AXIN1O15169 862 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 ACOX3O15254 700 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 NOL3O60936 208 aaKnown RBP15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 ZNF143P52747 638 aaPredicted RBP15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 INTS11Q5TA45 600 aaKnown RBP15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 SCYL2Q6P3W7 929 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 ABRAXAS1Q6UWZ7 409 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 CCDC60Q8IWA6 550 aaPredicted RBP15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 RXFP2Q8WXD0 754 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 MCRS1Q96EZ8 462 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 ARMC1Q9NVT9 282 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 GABBR1Q9UBS5 961 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 SARDHQ9UL12 918 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 OAZ3Q9UMX2 235 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 AURKCQ9UQB9 309 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 LTBP1Q14766 1721 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 FER1L6Q2WGJ9 1857 aa15.86■□□□□ 0.13
CSNK1A1-202ENST00000377843 PSMD11O00231 422 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 MSI1O43347 362 aaKnown RBP15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 SEC14L2O76054 403 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 C2P06681 752 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 NAT1P18440 290 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 FSTL1Q12841 308 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 DGKDQ16760 1214 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 XAF1Q6GPH4 301 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 NIPA1Q7RTP0 329 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms