RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 HTR7P34969 479 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 CCDC15Q0P6D6 951 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 BST1Q10588 318 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 RASIP1Q5U651 963 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 TCF7L2Q9NQB0 619 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 CHRAC1Q9NRG0 131 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 CYTH4Q9UIA0 394 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.69□□□□□ -0.06
TCOF1-202ENST00000377797 ZBTB42B2RXF5 422 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 C1RP00736 705 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 HOXB8P17481 243 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-202ENST00000377797 DRD4P21917 467 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 GABRB2P47870 512 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 NDNQ99608 321 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 TMPRSS4Q9NRS4 437 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 PRDM4Q9UKN5 801 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 PCDHGB4Q9UN71 923 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 RNF103-CHMP3A0A140T963 221 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 ZNF623O75123 536 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 ACRP10323 421 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 CALB2P22676 271 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 STX5Q13190 355 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 GALNT3Q14435 633 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 OASLQ15646 514 aaKnown RBP14.69□□□□□ -0.06
TCOF1-202ENST00000377797 ADCK2Q7Z695 626 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 TEX9Q8N6V9 391 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 UNC93B1Q9H1C4 597 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 GBA3Q9H227 469 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 SCOCQ9UIL1 159 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 PCDHB9Q9Y5E1 797 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 MYH15Q9Y2K3 1946 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 ACSL4O60488 711 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 MT-CYBP00156 380 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-202ENST00000377797 FGBP02675 491 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 CHRNA1P02708 482 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 CCDC166P0CW27 439 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 TRIP4Q15650 581 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-202ENST00000377797 RAB42Q8N4Z0 105 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 RTL3Q8N8U3 475 aaKnown RBP14.69□□□□□ -0.06
TCOF1-202ENST00000377797 PIP4K2CQ8TBX8 421 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 ZNF296Q8WUU4 475 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-202ENST00000377797 PHACTR1Q9C0D0 580 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 SLC17A7Q9P2U7 560 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 ORC6Q9Y5N6 252 aa14.69□□□□□ -0.06
TCOF1-202ENST00000377797 THRAP10827 490 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 POLR2EP19388 210 aaKnown RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 FOXD4Q12950 439 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 PARP15Q460N3 678 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 TEDDM1Q5T9Z0 273 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 CIR1Q86X95 450 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 FBXO39Q8N4B4 442 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 MFSD3Q96ES6 412 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 PEBP4Q96S96 227 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 ARMCX1Q9P291 453 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 MYH9P35579 1960 aaKnown RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 KIAA0100Q14667 2235 aaKnown RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 COL24A1Q17RW2 1714 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 HLA-DPA1P20036 260 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 ZNF280BQ86YH2 543 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 SNX15Q9NRS6 342 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 CHKBQ9Y259 395 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 KIAA1551Q9HCM1 1747 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 PIGNO95427 931 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 FGF1P05230 155 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 ATP5BP06576 529 aaKnown RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 CCL5P13501 91 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 SOX11P35716 441 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 DDX39BQ13838 428 aaKnown RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 MARCH8Q5T0T0 291 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 GOLGA4Q13439 2230 aaKnown RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 PRRC2BQ5JSZ5 2229 aaKnown RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 SLC38A8A6NNN8 435 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 E2F6O75461 281 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 CDC25CP30307 473 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 PEX19P40855 299 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 KCNK10P57789 538 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 SNRPD1P62314 119 aaKnown RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 PPP1R15BQ5SWA1 713 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 PKN3Q6P5Z2 889 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 TNS4Q8IZW8 715 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 OXNAD1Q96HP4 312 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-202ENST00000377797 NPY6RQ99463 290 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 BBS2Q9BXC9 721 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 ZDHHC6Q9H6R6 413 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 MIOSQ9NXC5 875 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 CFAP97Q9P2B7 532 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 AURKCQ9UQB9 309 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 STARD13Q9Y3M8 1113 aa14.68□□□□□ -0.06
TCOF1-202ENST00000377797 MATN3O15232 486 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 COL6A1P12109 1028 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 PRKAA2P54646 552 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 LRRC36Q1X8D7 754 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 NCBP2-AS2Q69YL0 99 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 RBM23Q86U06 439 aaKnown RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 OR7D4Q8NG98 312 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 PIWIL2Q8TC59 973 aaKnown RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 CASP10Q92851 521 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 CENPKQ9BS16 269 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 BPIFA1Q9NP55 256 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 THG1LQ9NWX6 298 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms