RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 FSCN1Q16658 493 aaKnown RBP16.48■□□□□ 0.23
TRIM27-202ENST00000377199 LIPMQ5VYY2 423 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 LDB1Q86U70 411 aaPredicted RBP16.48■□□□□ 0.23
TRIM27-202ENST00000377199 MFSD6LQ8IWD5 586 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 CENPLQ8N0S6 344 aaPredicted RBP16.48■□□□□ 0.23
TRIM27-202ENST00000377199 GPAMQ9HCL2 828 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 ACOT9Q9Y305 439 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 LAMA3Q16787 3333 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 SBF1O95248 1867 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 C9IYK1 514 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 HHLA1C9JL84 531 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 HDAC3O15379 428 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 CRABP2P29373 138 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 MAGEA12P43365 314 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 GJA9P57773 515 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 CSHL1Q14406 222 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 GNASQ5JWF2 1037 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 BHLHA9Q7RTU4 235 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 NPAS2Q99743 824 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 TRPV6Q9H1D0 765 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 RBM22Q9NW64 420 aaKnown RBP eCLIP16.47■□□□□ 0.237e-6■■■■□ 24.6
TRIM27-202ENST00000377199 DLX3O60479 287 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 PGK1P00558 417 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 SLC1A2P43004 574 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 CXCR3P49682 368 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 SLC12A2P55011 1212 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 SCAPQ12770 1279 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 PCBP1Q15365 356 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■■□ 20.2
TRIM27-202ENST00000377199 MMEL1Q495T6 779 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 SH2D4BQ5SQS7 431 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 RASIP1Q5U651 963 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 PTAR1Q7Z6K3 402 aaPredicted RBP16.47■□□□□ 0.23
TRIM27-202ENST00000377199 LRRTM3Q86VH5 581 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 ZNF483Q8TF39 744 aaPredicted RBP16.47■□□□□ 0.23
TRIM27-202ENST00000377199 GPR22Q99680 433 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 KLHL4Q9C0H6 718 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 SLC39A8Q9C0K1 460 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 RHOJQ9H4E5 214 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 TLL2Q9Y6L7 1015 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 MATN2O00339 956 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 MTSS1O43312 755 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 F9P00740 461 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 ITGB1P05556 798 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 ALOX15P16050 662 aaPredicted RBP16.47■□□□□ 0.23
TRIM27-202ENST00000377199 STMN1P16949 149 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 THOP1P52888 689 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 ZNF789Q5FWF6 425 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 LRRC8EQ6NSJ5 796 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 ACAD11Q709F0 780 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 DSELQ8IZU8 1212 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 EXT2Q93063 718 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 PHF21BQ96EK2 531 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 SLC38A7Q9NVC3 462 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 RAP2CQ9Y3L5 183 aa16.47■□□□□ 0.23
TRIM27-202ENST00000377199 PAGE1O75459 146 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 DDHD2O94830 711 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 MYL4P12829 197 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 ETS2P15036 469 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 GRIK1P39086 918 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 GRIK3Q13003 919 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 SLC12A1Q13621 1099 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 CYLC2Q14093 348 aaPredicted RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 PGM2L1Q6PCE3 622 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 AGMOQ6ZNB7 445 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 ANKRD23Q86SG2 305 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 FCRL2Q96LA5 508 aaPredicted RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 PAPOLBQ9NRJ5 636 aaKnown RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 SPATS2LQ9NUQ6 558 aaKnown RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 CDH9Q9ULB4 789 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 CDYLQ9Y232 598 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 MTF2Q9Y483 593 aaPredicted RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 RALGAPA2Q2PPJ7 1873 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 LAMA2P24043 3122 aaKnown RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 CCDC189A1A4V9 331 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 MAGEB16A2A368 324 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 ERI2A8K979 691 aaKnown RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 XRCC1P18887 633 aaPredicted RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 PCSK1P29120 753 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 CSE1LP55060 971 aaKnown RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 TAS2R39P59534 338 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 MAP2K5Q13163 448 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 MED21Q13503 144 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 FLOT2Q14254 428 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 RBM20Q5T481 1227 aaKnown RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 BTBD8Q5XKL5 378 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 PKN3Q6P5Z2 889 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 ZYG11AQ6WRX3 759 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 RTP3Q9BQQ7 232 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 C1QTNF1Q9BXJ1 281 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 BRD8Q9H0E9 1235 aa16.46■□□□□ 0.23
TRIM27-202ENST00000377199 AGO3Q9H9G7 860 aaKnown RBP16.46■□□□□ 0.23
TRIM27-202ENST00000377199 TMEM114B3SHH9 223 aa16.45■□□□□ 0.22
TRIM27-202ENST00000377199 GRID2O43424 1007 aa16.45■□□□□ 0.22
TRIM27-202ENST00000377199 HLA-DQB2P05538 268 aa16.45■□□□□ 0.22
TRIM27-202ENST00000377199 MSLNQ13421 630 aaPredicted RBP16.45■□□□□ 0.22
TRIM27-202ENST00000377199 ART3Q13508 389 aa16.45■□□□□ 0.22
TRIM27-202ENST00000377199 RAB41Q5JT25 222 aa16.45■□□□□ 0.22
TRIM27-202ENST00000377199 CNSTQ6PJW8 725 aa16.45■□□□□ 0.22
TRIM27-202ENST00000377199 PDSS2Q86YH6 399 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms