RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 WDCPQ9H6R7 721 aa17.42■□□□□ 0.38
TRIM27-201ENST00000377194 OR12D3Q9UGF7 316 aa17.42■□□□□ 0.38
TRIM27-201ENST00000377194 AK5Q9Y6K8 562 aa17.42■□□□□ 0.38
TRIM27-201ENST00000377194 SCN10AQ9Y5Y9 1956 aa17.42■□□□□ 0.38
TRIM27-201ENST00000377194 H3BNX3 289 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 TRMUO75648 421 aaKnown RBP17.41■□□□□ 0.38
TRIM27-201ENST00000377194 B3GAT3O94766 335 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 XIAPP98170 497 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 IFNL1Q8IU54 200 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 DEFB107AQ8IZN7 70 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 PPP1R14CQ8TAE6 165 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 DIS3LQ8TF46 1054 aaKnown RBP17.41■□□□□ 0.38
TRIM27-201ENST00000377194 CDKL2Q92772 493 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 SMARCD1Q96GM5 515 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 TMEM209Q96SK2 561 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 INIPQ9NRY2 104 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 PAIP2BQ9ULR5 123 aaKnown RBP17.41■□□□□ 0.38
TRIM27-201ENST00000377194 DMTF1Q9Y222 760 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 DNAJC16Q9Y2G8 782 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 E2F8A0AVK6 867 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 LRIG2O94898 1065 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 PRKCGP05129 697 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 CNTFP26441 200 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 CD52P31358 61 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 CNGA3Q16281 694 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 N4BP2L1Q5TBK1 243 aaPredicted RBP17.41■□□□□ 0.38
TRIM27-201ENST00000377194 CD300LGQ6UXG3 332 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 ATG14Q6ZNE5 492 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 AMIGO2Q86SJ2 522 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 SERINC5Q86VE9 423 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 LRRTM3Q86VH5 581 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 APOL2Q9BQE5 337 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 CSNK1G1Q9HCP0 422 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 TIMMDC1Q9NPL8 285 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 CHST12Q9NRB3 414 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 THAP1Q9NVV9 213 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 PTCH2Q9Y6C5 1203 aa17.41■□□□□ 0.38
TRIM27-201ENST00000377194 F8W810 466 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 AP1G1O43747 822 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 CRTAMO95727 393 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 POLBP06746 335 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 SRGAP2BP0DMP2 458 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 KCNA4P22459 653 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 HCAR3P49019 387 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 CXCR3P49682 368 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 CCR3P51677 355 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 AIF1P55008 147 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 FASTKD1Q53R41 847 aaKnown RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 C6orf52Q5T4I8 152 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 WDR75Q8IWA0 830 aaKnown RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 CERS2Q96G23 380 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 CELF6Q96J87 481 aaKnown RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 MLPHQ9BV36 600 aaPredicted RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 PADI3Q9ULW8 664 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 GIT1Q9Y2X7 761 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 SHROOM3Q8TF72 1996 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 MANSC4A6NHS7 340 aaPredicted RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 SIN3BO75182 1162 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 AP2A1O95782 977 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 ATP5BP06576 529 aaKnown RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 STT3AP46977 705 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 RPL10AP62906 217 aaKnown RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 MGAT3Q09327 533 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 LPIN1Q14693 890 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 KCTD11Q693B1 232 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 TAC4Q86UU9 113 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 SCAMP5Q8TAC9 235 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 ZSCAN18Q8TBC5 510 aaPredicted RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 SOCS4Q8WXH5 440 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 AGAP2Q99490 1192 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 PFDN4Q9NQP4 134 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 ZNF358Q9NW07 568 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 UBP1Q9NZI7 540 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 FAF1Q9UNN5 650 aaPredicted RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 SORCS3Q9UPU3 1222 aa17.4■□□□□ 0.38
TRIM27-201ENST00000377194 APOBEC2Q9Y235 224 aaKnown RBP17.4■□□□□ 0.38
TRIM27-201ENST00000377194 TTC3P53804 2025 aa17.39■□□□□ 0.38
TRIM27-201ENST00000377194 BIRC5O15392 142 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 ITGB1P05556 798 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 CRHR2Q13324 411 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 CERCAMQ5T4B2 595 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 MARVELD2Q8N4S9 558 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRIM27-201ENST00000377194 PIWIL2Q8TC59 973 aaKnown RBP17.39■□□□□ 0.37
TRIM27-201ENST00000377194 ACTRT2Q8TDY3 377 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 JADE3Q92613 823 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 MFSD3Q96ES6 412 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 ATXN7L3BQ96GX2 97 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 NAT9Q9BTE0 207 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 ARHGAP39Q9C0H5 1083 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 VANGL2Q9ULK5 521 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 AP4B1Q9Y6B7 739 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 MRPL42Q9Y6G3 142 aaKnown RBP17.39■□□□□ 0.37
TRIM27-201ENST00000377194 KLHL2O95198 593 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 TFPTP0C1Z6 253 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 PCSK1P29120 753 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 RPL9P32969 192 aaKnown RBP17.39■□□□□ 0.37
TRIM27-201ENST00000377194 GARSP41250 739 aaKnown RBP17.39■□□□□ 0.37
TRIM27-201ENST00000377194 PGFP49763 221 aa17.39■□□□□ 0.37
TRIM27-201ENST00000377194 ATXN3P54252 364 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms