RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 UBXN1Q04323 297 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 FBXL19Q6PCT2 694 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 C19orf48Q6RUI8 117 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 STRADAQ7RTN6 431 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 NEK11Q8NG66 645 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 TSC1Q92574 1164 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 CALN1Q9BXU9 219 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 OSBPL2Q9H1P3 480 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 RETREG1Q9H6L5 497 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 ADAM22Q9P0K1 906 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 ZFR2Q9UPR6 939 aaKnown RBP21.45■■□□□ 1.02
VSX1-201ENST00000376707 KRT3P12035 628 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 UNGP13051 313 aaPredicted RBP21.44■■□□□ 1.02
VSX1-201ENST00000376707 RHOQP17081 205 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 CKMT2P17540 419 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 ITGB7P26010 798 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 ACVRL1P37023 503 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 TYRO3Q06418 890 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 MANEALQ5VSG8 457 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 SEL1L3Q68CR1 1132 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 OR13H1Q8NG92 308 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 PCDHB18PQ96TA0 734 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 SELENOOQ9BVL4 669 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 TM6SF2Q9BZW4 377 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 ZDHHC6Q9H6R6 413 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 TMEM63CQ9P1W3 806 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 DNAI1Q9UI46 699 aa21.44■■□□□ 1.02
VSX1-201ENST00000376707 CXorf51AA0A1B0GTR3 108 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 FAM72CH0Y354 149 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 ADRB3P13945 408 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 CDK11BP21127 795 aaKnown RBP21.43■■□□□ 1.02
VSX1-201ENST00000376707 L1CAMP32004 1257 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 CLDN6P56747 220 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 GEMIN4P57678 1058 aaKnown RBP21.43■■□□□ 1.02
VSX1-201ENST00000376707 PTP4A2Q12974 167 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 MAPK8IP2Q13387 824 aaPredicted RBP21.43■■□□□ 1.02
VSX1-201ENST00000376707 HS1BP3Q53T59 392 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 FAM72AQ5TYM5 149 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 FAM72DQ6L9T8 149 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 FAM72BQ86X60 149 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 RYBPQ8N488 228 aaPredicted RBP21.43■■□□□ 1.02
VSX1-201ENST00000376707 FAM172AQ8WUF8 416 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 CENPIQ92674 756 aaPredicted RBP21.43■■□□□ 1.02
VSX1-201ENST00000376707 ARHGEF2Q92974 986 aaKnown RBP21.43■■□□□ 1.02
VSX1-201ENST00000376707 ISG20Q96AZ6 181 aaKnown RBP21.43■■□□□ 1.02
VSX1-201ENST00000376707 TBC1D31Q96DN5 1066 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 NDFIP2Q9NV92 336 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 SEPT11Q9NVA2 429 aaKnown RBP21.43■■□□□ 1.02
VSX1-201ENST00000376707 KLHL11Q9NVR0 708 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 TMEM248Q9NWD8 314 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 HPCAL4Q9UM19 191 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 ACTL7AQ9Y615 435 aa21.43■■□□□ 1.02
VSX1-201ENST00000376707 RAMP2O60895 175 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 LRIG2O94898 1065 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 CALB1P05937 261 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 PLEKP08567 350 aaPredicted RBP21.42■■□□□ 1.02
VSX1-201ENST00000376707 GPD1P21695 349 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 RFC1P35251 1148 aaPredicted RBP21.42■■□□□ 1.02
VSX1-201ENST00000376707 HDAC4P56524 1084 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 GSCP56915 257 aaPredicted RBP21.42■■□□□ 1.02
VSX1-201ENST00000376707 CLDN2P57739 230 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 RPS21P63220 83 aaKnown RBP21.42■■□□□ 1.02
VSX1-201ENST00000376707 ILKQ13418 452 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 POLD3Q15054 466 aaPredicted RBP21.42■■□□□ 1.02
VSX1-201ENST00000376707 CLEC16AQ2KHT3 1053 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 TMEM259Q4ZIN3 620 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 HES3Q5TGS1 186 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 KIAA1161Q6NSJ0 714 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 GCNT7Q6ZNI0 430 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 NLRP14Q86W24 1093 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 CCDC185Q8N715 623 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 FEM1CQ96JP0 617 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 BPIFA3Q9BQP9 254 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 NAT10Q9H0A0 1025 aaKnown RBP21.42■■□□□ 1.02
VSX1-201ENST00000376707 MAGEH1Q9H213 219 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 FADS3Q9Y5Q0 445 aa21.42■■□□□ 1.02
VSX1-201ENST00000376707 ANKRD11Q6UB99 2663 aaPredicted RBP21.42■■□□□ 1.02
VSX1-201ENST00000376707 A6NNZ2 444 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 SIGLEC6O43699 453 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 CD160O95971 181 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 ATP1A3P13637 1013 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 DGKAP23743 735 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 ZNF211Q13398 564 aaPredicted RBP21.41■■□□□ 1.02
VSX1-201ENST00000376707 COL28A1Q2UY09 1125 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 PARS2Q7L3T8 475 aaKnown RBP21.41■■□□□ 1.02
VSX1-201ENST00000376707 ABI3BPQ7Z7G0 1075 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 PHF13Q86YI8 300 aaPredicted RBP21.41■■□□□ 1.02
VSX1-201ENST00000376707 PLPP6Q8IY26 295 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 SLC25A45Q8N413 288 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 AOPEPQ8N6M6 819 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 C3orf20Q8ND61 904 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 OR6K2Q8NGY2 324 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 FAM174AQ8TBP5 190 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 HNRNPLLQ8WVV9 542 aaKnown RBP21.41■■□□□ 1.02
VSX1-201ENST00000376707 NTAN1Q96AB6 310 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 NXPE2Q96DL1 559 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 SLC17A9Q9BYT1 436 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 MAGEB5Q9BZ81 275 aa21.41■■□□□ 1.02
VSX1-201ENST00000376707 DOCK4Q8N1I0 1966 aa21.4■■□□□ 1.02
VSX1-201ENST00000376707 ANKRD62A6NC57 917 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms