RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 TKTL2Q9H0I9 626 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 TSPYL2Q9H2G4 693 aaPredicted RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 WDCPQ9H6R7 721 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 WDR55Q9H6Y2 383 aaPredicted RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 CPSF2Q9P2I0 782 aaKnown RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 CDH9Q9ULB4 789 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 SLC39A10Q9ULF5 831 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 DYNC1LI2O43237 492 aaPredicted RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 PIGNO95427 931 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 PABPC4LP0CB38 370 aaKnown RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 HSPA1AP0DMV8 641 aaKnown RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 HSPA1BP0DMV9 641 aaKnown RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 TPH1P17752 444 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 PSMD8P48556 350 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 RABGGTBP53611 331 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 PRPSAP1Q14558 356 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 LRRC8EQ6NSJ5 796 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 FBXL19Q6PCT2 694 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 SDCCAG8Q86SQ7 713 aaPredicted RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 PGAM4Q8N0Y7 254 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 PQLC1Q8N2U9 271 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 EFCAB3Q8N7B9 438 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 PTCD2Q8WV60 388 aaKnown RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 CCDC124Q96CT7 223 aaKnown RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 ZNF419Q96HQ0 510 aaPredicted RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 GBP5Q96PP8 586 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 EPB41L1Q9H4G0 881 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 ZBTB26Q9HCK0 441 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 ARHGEF38Q9NXL2 777 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 RUVBL2Q9Y230 463 aaKnown RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 AAR2Q9Y312 384 aaKnown RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 KLHL33A6NCF5 533 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 DLX3O60479 287 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 NPHS1O60500 1241 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 JCHAINP01591 159 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 SERPINB5P36952 375 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 CCR10P46092 362 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 PSEN2P49810 448 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 DNAJB13P59910 316 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 COG7P83436 770 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 CREB5Q02930 508 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 PPM1LQ5SGD2 360 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 SH2D4BQ5SQS7 431 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 TMC7Q7Z402 723 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 ARHGAP12Q8IWW6 846 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 KDM1BQ8NB78 822 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 PPP1R13LQ8WUF5 828 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 MOCOSQ96EN8 888 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 SLC10A4Q96EP9 437 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 SERPINI1Q99574 410 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 APOL2Q9BQE5 337 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 TLK1Q9UKI8 766 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 SNX10Q9Y5X0 201 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 SLC4A7Q9Y6M7 1214 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 PGK1P00558 417 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 EPHA3P29320 983 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 CYP2C18P33260 490 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 GRIA2P42262 883 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 ALDH1A3P47895 512 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 RAB10P61026 200 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 CYLC2Q14093 348 aaPredicted RBP10.82□□□□□ -0.68
ABCF1-202ENST00000376545 UGP2Q16851 508 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 CNPY1Q3B7I2 92 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 MANEALQ5VSG8 457 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 ZFP1Q6P2D0 407 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 OTOP3Q7RTS5 596 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 PLEKHH3Q7Z736 793 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 SNX32Q86XE0 403 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 PELI3Q8N2H9 469 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 ZFP42Q96MM3 310 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 HAPLN3Q96S86 360 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 TBL1YQ9BQ87 522 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 RTP3Q9BQQ7 232 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 TANC1Q9C0D5 1861 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 TREX1Q9NSU2 369 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 SLC38A7Q9NVC3 462 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 RIMS3Q9UJD0 308 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 HTR7P34969 479 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 DPP6P42658 865 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 USP10Q14694 798 aaKnown RBP10.82□□□□□ -0.68
ABCF1-202ENST00000376545 TRIP10Q15642 601 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 AFMIDQ63HM1 303 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 FAM171BQ6P995 826 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 CTU1Q7Z7A3 348 aaKnown RBP10.82□□□□□ -0.68
ABCF1-202ENST00000376545 CEP97Q8IW35 865 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 KCTD4Q8WVF5 259 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 BRI3BPQ8WY22 251 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 SMARCD1Q96GM5 515 aa10.82□□□□□ -0.68
ABCF1-202ENST00000376545 GOLGA8QA0A0J9YX86 632 aa10.81□□□□□ -0.68
ABCF1-202ENST00000376545 GOLGA8OA6NCC3 632 aa10.81□□□□□ -0.68
ABCF1-202ENST00000376545 GOLGA8NF8WBI6 632 aa10.81□□□□□ -0.68
ABCF1-202ENST00000376545 GOLGA8TH3BQL2 631 aa10.81□□□□□ -0.68
ABCF1-202ENST00000376545 ACOT8O14734 319 aa10.81□□□□□ -0.68
ABCF1-202ENST00000376545 PHGDHO43175 533 aaKnown RBP10.81□□□□□ -0.68
ABCF1-202ENST00000376545 JUNP05412 331 aaKnown RBP10.81□□□□□ -0.68
ABCF1-202ENST00000376545 ZNF865P0CJ78 1059 aaPredicted RBP10.81□□□□□ -0.68
ABCF1-202ENST00000376545 NUDT2P50583 147 aa10.81□□□□□ -0.68
ABCF1-202ENST00000376545 THOP1P52888 689 aa10.81□□□□□ -0.68
ABCF1-202ENST00000376545 NAGLUP54802 743 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms