RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 APBB2Q92870 758 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 SEMA4BQ9NPR2 832 aaPredicted RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 SLC17A7Q9P2U7 560 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 UNCXA6NJT0 531 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 SNX3O60493 162 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 ABHD2P08910 425 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 HADHBP55084 474 aaKnown RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 HTRA3P83110 453 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 GPR158Q5T848 1215 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 LDB1Q86U70 411 aaPredicted RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 ARL14EPQ8N8R7 260 aaPredicted RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 HPS4Q9NQG7 708 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 DTLQ9NZJ0 730 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 ZMYND8Q9ULU4 1186 aaPredicted RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 FAF1Q9UNN5 650 aaPredicted RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 C5orf58C9J3I9 102 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 KRT16P08779 473 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 CALB2P22676 271 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 HNRNPH1P31943 449 aaKnown RBP18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 MAP3K10Q02779 954 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 PTP4A2Q12974 167 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 TRAPPC5Q8IUR0 188 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 ZNF567Q8N184 647 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 HJURPQ8NCD3 748 aaPredicted RBP18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 MYH10P35580 1976 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 SLC2A4P14672 509 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 LAG3P18627 525 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 PTGIRP43119 386 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 IL2P60568 153 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 CACHD1Q5VU97 1274 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 LRRC49Q8IUZ0 686 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 SCUBE1Q8IWY4 988 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 TAGAPQ8N103 731 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 OXNAD1Q96HP4 312 aaPredicted RBP18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 CAPN10Q9HC96 672 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 CD248Q9HCU0 757 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 MAN1C1Q9NR34 630 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 GNG14A0A1W2PPG7 69 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 MEI4A8MW99 385 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 GJA5P36382 358 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 RHBDF2Q6PJF5 856 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 ACE2Q9BYF1 805 aaPredicted RBP18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 H2AFYO75367 372 aaKnown RBP18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 IL1BP01584 269 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 DSC2Q02487 901 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 PACS1Q6VY07 963 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 DNAJC14Q6Y2X3 702 aaPredicted RBP18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 OSTM1Q86WC4 334 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 CRYBG2Q8N1P7 616 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 LZICQ8WZA0 190 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 TRIM4Q9C037 500 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 LNPEPQ9UIQ6 1025 aa18.17■□□□□ 0.5
PTPDC1-202ENST00000375360 NEDD8-MDP1E9PL57 170 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 SLCO1B7G3V0H7 640 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 CCND1P24385 295 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 CNDP1Q96KN2 507 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 TAGLN3Q9UI15 199 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 STYXL1Q9Y6J8 313 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 MYH6P13533 1939 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 PCNAP12004 261 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 L1CAMP32004 1257 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 RAP1GDS1P52306 607 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 ENPEPQ07075 957 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 SGCGQ13326 291 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 NFYCQ13952 458 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 CES5AQ6NT32 575 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 USP45Q70EL2 814 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 FAM162AQ96A26 154 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 PIGVQ9NUD9 493 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 PCDHGC4Q9Y5F7 938 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 TACR2P21452 398 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 ARL4DP49703 201 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 SETMARQ53H47 684 aaPredicted RBP18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 GPSM1Q86YR5 675 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 PIWIL2Q8TC59 973 aaKnown RBP18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 PRPF18Q99633 342 aaKnown RBP18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 MYLK2Q9H1R3 596 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 CREBZFQ9NS37 354 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 GKN1Q9NS71 199 aa18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 TDRKHQ9Y2W6 561 aaKnown RBP18.16■□□□□ 0.5
PTPDC1-202ENST00000375360 ATP6AP2A0A1C7CYW4 349 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 KCNU1A8MYU2 1149 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 ATP6AP2O75787 350 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 ACADMP11310 421 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 CREB1P16220 341 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 CDH13P55290 713 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 WNT7BP56706 349 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 MED21Q13503 144 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 RNASEH2BQ5TBB1 312 aaKnown RBP18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 ANKS1BQ7Z6G8 1248 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 KAT6AQ92794 2004 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 ATP13A3Q9H7F0 1226 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 SNX15Q9NRS6 342 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 ARL15Q9NXU5 204 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 Q9Y3F1 56 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 SYN3O14994 580 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 RAD51BO15315 384 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 AIF1P55008 147 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 C1orf220Q5T0J3 134 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 SCIMPQ6UWF3 145 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms