RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TRPV3Q8NET8 790 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SMG7Q92540 1137 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 CRISPLD1Q9H336 500 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 LMCD1Q9NZU5 365 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SIK3Q9Y2K2 1263 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 NUP160Q12769 1436 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 C12orf71A8MTZ7 269 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 LSM8O95777 96 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 MRPS10P82664 201 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 MERTKQ12866 999 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ZNF667Q5HYK9 610 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 LRRC66Q68CR7 880 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 FAM126BQ8IXS8 530 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 RDH12Q96NR8 316 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 MAP3K14Q99558 947 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ARPC5LQ9BPX5 153 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 KLHL28Q9NXS3 571 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 DUSP10Q9Y6W6 482 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 M0QZ92 97 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PTTG1O95997 202 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 HLA-DRAP01903 254 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 RPA3P35244 121 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 KCNJ1P48048 391 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 LLGL1Q15334 1064 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SLC22A16Q86VW1 577 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SIMC1Q8NDZ2 872 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 LILRB4Q8NHJ6 448 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 FUNDC2Q9BWH2 189 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 CLCA2Q9UQC9 943 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 E2F3O00716 465 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 DGKQP52824 942 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PPP5CP53041 499 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ATP6V0D1P61421 351 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 HMGN3Q15651 99 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SAMD14Q8IZD0 417 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 RCOR3Q9P2K3 495 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 TBX3O15119 743 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 AMPD1P23109 780 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PGS1Q32NB8 556 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ANKS6Q68DC2 871 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SLC25A41Q8N5S1 370 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 OR7G2Q8NG99 324 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 MRPL57Q9BQC6 102 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 KBTBD4Q9NVX7 518 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 HPSEQ9Y251 543 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 A0A1B0GVI7 797 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 INPPL1O15357 1258 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 OR2B3O76000 313 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 NFKB1P19838 968 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PVALBP20472 110 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 COBLL1Q53SF7 1204 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ITIH5Q86UX2 942 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 TSEN2Q8NCE0 465 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 GAL3ST3Q96A11 431 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 TMEM121Q9BTD3 319 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ZNF696Q9H7X3 374 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PPEF2O14830 753 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PROZP22891 400 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 CAPZA2P47755 286 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 NPY2RP49146 381 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 CBLBQ13191 982 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ADAM15Q13444 863 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 WDR59Q6PJI9 974 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ART4Q93070 314 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 TM9SF3Q9HD45 589 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 LEF1Q9UJU2 399 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 ATP5F1P24539 256 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 EIF2DP41214 584 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 GTF2H3Q13889 308 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PKN1Q16512 942 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PET117Q6UWS5 81 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ETNPPLQ8TBG4 499 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PRR12Q9ULL5 1215 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 TLR6Q9Y2C9 796 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 POLR1CO15160 346 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 TLL1O43897 1013 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 KDM4BO94953 1096 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PRKCAP17252 672 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 HIST2H2ACQ16777 129 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 HIST2H2AA3Q6FI13 130 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 FAM160B2Q86V87 743 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SETD6Q8TBK2 473 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 C1GALT1C1Q96EU7 318 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 FAM89AQ96GI7 184 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SAGE1Q9NXZ1 904 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 AHSA1O95433 338 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 CYP1A1P04798 512 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 EFNA5P52803 228 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 CDKL1Q00532 357 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PTGES3Q15185 160 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 CEP76Q8TAP6 659 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 HEXDCQ8WVB3 486 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 CERS2Q96G23 380 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ZNF570Q96NI8 536 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PTGFRNQ9P2B2 879 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 MTRRQ9UBK8 725 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SLC25A13Q9UJS0 675 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PLLPQ9Y342 182 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 AIPO00170 330 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 IPO13O94829 963 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms