RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 BPGMP07738 259 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 NFKBIAP25963 317 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 YWHAQP27348 245 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 HOXD11P31277 338 aaPredicted RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 MTTPP55157 894 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 TMPRSS15P98073 1019 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 MRPL58Q14197 206 aaKnown RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 SMUG1Q53HV7 270 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 FAM171A1Q5VUB5 890 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PTCD2Q8WV60 388 aaKnown RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 TRIM56Q9BRZ2 755 aaKnown RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 TMEM175Q9BSA9 504 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 C12orf65Q9H3J6 166 aaKnown RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 RETREG1Q9H6L5 497 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 GLOD4Q9HC38 313 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 ALG13Q9NP73 1137 aaKnown RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 TLR8Q9NR97 1041 aaKnown RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 ZFP69BQ9UJL9 534 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PLXNA3P51805 1871 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 B4GALT3O60512 393 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 MPOP05164 745 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 SP100P23497 879 aaPredicted RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 TYK2P29597 1187 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 SERPINB8P50452 374 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 NDST2P52849 883 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 MUM1Q2TAK8 710 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 CDHR3Q6ZTQ4 885 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 CRLF3Q8IUI8 442 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 ARHGAP12Q8IWW6 846 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PPP1R14CQ8TAE6 165 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 INPP5DQ92835 1189 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PTPRN2Q92932 1015 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 FATE1Q969F0 183 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 SLC39A13Q96H72 371 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 NMUR1Q9HB89 426 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 ENTPD7Q9NQZ7 604 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 CREBZFQ9NS37 354 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PPARGC1AQ9UBK2 798 aaKnown RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 DNAJB4Q9UDY4 337 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 NEU3Q9UQ49 428 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 FAM92AA1XBS5 289 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 TPP1O14773 563 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 MAFKO60675 156 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 ERVK-10P10266 1014 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 IDO1P14902 403 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 RHOQP17081 205 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 FGFR3P22607 806 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 GRK4P32298 578 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 KPNA1P52294 538 aaPredicted RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 RPL10AP62906 217 aaKnown RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 CLPPQ16740 277 aaPredicted RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 DDR2Q16832 855 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PCID2Q5JVF3 399 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 AFMIDQ63HM1 303 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PDPK2PQ6A1A2 396 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 ZSCAN18Q8TBC5 510 aaPredicted RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 FBXO32Q969P5 355 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 ISL2Q96A47 359 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 SPATA17Q96L03 361 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 RBBP8Q99708 897 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 TBL1YQ9BQ87 522 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 SLC39A8Q9C0K1 460 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 FAM192AQ9GZU8 254 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 ARHGEF3Q9NR81 526 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PIH1D1Q9NWS0 290 aaKnown RBP8.34□□□□□ -1.07
UBR4-202ENST00000375224 KCNK4Q9NYG8 393 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 HS3ST4Q9Y661 456 aa8.34□□□□□ -1.07
UBR4-202ENST00000375224 PITPNM1O00562 1244 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 MSI1O43347 362 aaKnown RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 ATP9BO43861 1147 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 USP12O75317 370 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 MOCS2O96007 188 aaPredicted RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 CDK7P50613 346 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 LIMK2P53671 638 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 PHEXP78562 749 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 ZBTB16Q05516 673 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 STX3Q13277 289 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 TRIP4Q15650 581 aaPredicted RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 CHI3L2Q15782 390 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 CCDC153Q494R4 210 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 ANO7Q6IWH7 933 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 POTEHQ6S545 545 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 STRA8Q7Z7C7 330 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 KCNMB4Q86W47 210 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 UNC5BQ8IZJ1 945 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 GABPB2Q8TAK5 448 aaPredicted RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 CLIP3Q96DZ5 547 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 BTN2A3PQ96KV6 586 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 CEP295NLQ96MC4 621 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 FCRL3Q96P31 734 aaPredicted RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 CATSPER2Q96P56 530 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 CDK5RAP1Q96SZ6 601 aaKnown RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 SLC39A3Q9BRY0 314 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 KIFC1Q9BW19 673 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 ZYG11BQ9C0D3 744 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 FAM96AQ9H5X1 160 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 OCEL1Q9H607 264 aa8.33□□□□□ -1.08
UBR4-202ENST00000375224 MRM3Q9HC36 420 aaKnown RBP8.33□□□□□ -1.08
UBR4-202ENST00000375224 MID2Q9UJV3 735 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms