RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 CPT2P23786 658 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 HARS2P49590 506 aaKnown RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 TBL3Q12788 808 aaKnown RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 MPEG1Q2M385 716 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 TMEM214Q6NUQ4 689 aaKnown RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 KIAA1211LQ6NV74 962 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 EFL1Q7Z2Z2 1120 aaKnown RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 SLC51BQ86UW2 128 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 MAPKAPK5Q8IW41 473 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 TTC29Q8NA56 475 aaPredicted RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 PSD4Q8NDX1 1056 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 HEXDCQ8WVB3 486 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 RFFLQ8WZ73 363 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 ATG4CQ96DT6 458 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 FAM120BQ96EK7 910 aaKnown RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 FER1L6-AS2Q96M78 137 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 NOC4LQ9BVI4 516 aaKnown RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 ZSCAN16Q9H4T2 348 aaPredicted RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 MLXIPQ9HAP2 919 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 SLC27A5Q9Y2P5 690 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 TRAF6Q9Y4K3 522 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 PCDHB4Q9Y5E5 795 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 NID2Q14112 1375 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 PLK4O00444 970 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 ARHGAP6O43182 974 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 KRT16P08779 473 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 GPS1Q13098 491 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 TTMPQ5BVD1 217 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 EARS2Q5JPH6 523 aaKnown RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 VWA5B1Q5TIE3 1220 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 BLOC1S2Q6QNY1 142 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 NSUN4Q96CB9 384 aaKnown RBP9.18□□□□□ -0.94
UBR4-201ENST00000375218 SGF29Q96ES7 293 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 TMEM117Q9H0C3 514 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 C12orf10Q9HB07 376 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 SLC40A1Q9NP59 571 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 NGBQ9NPG2 151 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 KCNK7Q9Y2U2 307 aa9.18□□□□□ -0.94
UBR4-201ENST00000375218 MFSD2BA6NFX1 497 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 KIF28PB7ZC32 967 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 ZNF263O14978 683 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 SUSD5O60279 629 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 MITFO75030 526 aaPredicted RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 RXRBP28702 533 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 SLC7A1P30825 629 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 SLC15A1P46059 708 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 RRP1BQ14684 758 aaKnown RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 CEBPEQ15744 281 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 FBXO47Q5MNV8 452 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 ADGRF1Q5T601 910 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 LRTOMTQ8WZ04 291 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 BRF1Q92994 677 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 C11orf24Q96F05 449 aaPredicted RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 LRFN3Q9BTN0 628 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 TTYH1Q9H313 450 aaPredicted RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 THAP1Q9NVV9 213 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 SERTAD1Q9UHV2 236 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 IPO11Q9UI26 975 aaKnown RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 MTMR6Q9Y217 621 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 SPACA6W5XKT8 324 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 FAM234BA2RU67 622 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 PRR23AA6NEV1 266 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 TNNI3P19429 210 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 MCM7P33993 719 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 CLCNKAP51800 687 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 CYP27A1Q02318 531 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 ZFPM1Q8IX07 1006 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 EXD1Q8NHP7 514 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 OMA1Q96E52 524 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 FUCA2Q9BTY2 467 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 UBE2OQ9C0C9 1292 aaKnown RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 SLC26A1Q9H2B4 701 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 KLK14Q9P0G3 267 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 LRP2BPQ9P2M1 347 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 AGAP1Q9UPQ3 857 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 DVL2O14641 736 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 EZRP15311 586 aaKnown RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 CDC25BP30305 580 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 FCGRTP55899 365 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 HUNKP57058 714 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 STARD6P59095 220 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 MAP3K10Q02779 954 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 ACVR2BQ13705 512 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 AFMIDQ63HM1 303 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 TMEM270Q6UE05 265 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 GLRX5Q86SX6 157 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 DENND1CQ8IV53 801 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 TMEM102Q8N9M5 508 aaPredicted RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 FIBINQ8TAL6 211 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 ZNF596Q8TC21 504 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 LRRC15Q8TF66 581 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 DNAJC1Q96KC8 554 aaKnown RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 USB1Q9BQ65 265 aaKnown RBP9.17□□□□□ -0.94
UBR4-201ENST00000375218 BRD7Q9NPI1 651 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 PCDHB16Q9NRJ7 776 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 IL17RBQ9NRM6 502 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 TFCP2L1Q9NZI6 479 aa9.17□□□□□ -0.94
UBR4-201ENST00000375218 C5orf51A6NDU8 294 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 KCNJ18B7U540 433 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms