RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 GLRA3O75311 464 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 MMP2P08253 660 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ELF1P32519 619 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TWF1Q12792 350 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TAF12Q16514 161 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 INSCQ1MX18 579 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CHST9Q7L1S5 443 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 OTOAQ7RTW8 1153 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 NECAB2Q7Z6G3 386 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 STRA8Q7Z7C7 330 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CNTN4Q8IWV2 1026 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 RAB3IL1Q8TBN0 382 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 KLHL5Q96PQ7 755 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 RANBP9Q96S59 729 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 YME1L1Q96TA2 773 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PRKD2Q9BZL6 878 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SLC13A1Q9BZW2 595 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 RXFP1Q9HBX9 757 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 KLHL14Q9P2G3 628 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 WDR91A4D1P6 747 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PRRG1O14668 218 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 BIRC5O15392 142 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 FSBPO95073 299 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 LATS1O95835 1130 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ACVRL1P37023 503 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SERPINB8P50452 374 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 EPHB3P54753 998 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PDE1CQ14123 709 aaPredicted RBP18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 LBRQ14739 615 aaKnown RBP18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 HSP90AA5PQ58FG0 334 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CCDC63Q8NA47 563 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZNF398Q8TD17 642 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PTPRN2Q92932 1015 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 IL23AQ9NPF7 189 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 HAUS2Q9NVX0 235 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SIRPGQ9P1W8 387 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 STOML2Q9UJZ1 356 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 HELZP42694 1942 aaKnown RBP18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ALPK3Q96L96 1907 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ANKRD36A6QL64 1941 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TIMM44O43615 452 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SIN3BO75182 1162 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CLDN11O75508 207 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 KLKB1P03952 638 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 GSTA1P08263 222 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CORO1AP31146 461 aaKnown RBP18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 HADHAP40939 763 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PDE1BQ01064 536 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 GNA12Q03113 381 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 POU6F1Q14863 301 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ALG1LQ6GMV1 187 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 RFWD3Q6PCD5 774 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 DNAJB7Q7Z6W7 309 aaPredicted RBP18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TMEM150AQ86TG1 271 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZNF354CQ86Y25 554 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 DENND1CQ8IV53 801 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PGBD5Q8N414 524 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ARRDC2Q8TBH0 407 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ATP2A3Q93084 1043 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PRICKLE1Q96MT3 831 aaPredicted RBP18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 AGAP2Q99490 1192 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 RNF38Q9H0F5 515 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZBP1Q9H171 429 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TREX1Q9NSU2 369 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 DCDC2Q9UHG0 476 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SSX2IPQ9Y2D8 614 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PCDHB12Q9Y5F1 795 aa18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZFP37Q9Y6Q3 630 aaPredicted RBP18.25■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ACRP10323 421 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 HOXD9P28356 352 aaPredicted RBP18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CD86P42081 329 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 DSC2Q02487 901 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CCDC15Q0P6D6 951 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SF3A3Q12874 501 aaKnown RBP eCLIP18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 SLC14A2Q15849 920 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ADGRF1Q5T601 910 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 FYB2Q5VWT5 728 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 KIAA0930Q6ICG6 404 aaPredicted RBP18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ITIH5Q86UX2 942 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 CFAP52Q8N1V2 620 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 DCLK2Q8N568 766 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 GBP7Q8N8V2 638 aaPredicted RBP18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ARMC2Q8NEN0 867 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ZNF778Q96MU6 729 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 DDX50Q9BQ39 737 aaKnown RBP18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 POLR1EQ9GZS1 481 aaKnown RBP18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 IARS2Q9NSE4 1012 aaKnown RBP18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ABCF3Q9NUQ8 709 aa18.24■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ILVBLA1L0T0 632 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 C2orf78A6NCI8 922 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TEX28O15482 410 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TGDSO95455 350 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 OLFM2O95897 454 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 F11P03951 625 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 PAMP19021 973 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 BGNP21810 368 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 MAGEA9P43362 315 aa18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 ARCN1P48444 511 aaKnown RBP18.23■□□□□ 0.51
HLA-DQB1-201ENST00000374943 MAXP61244 160 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms