RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TCEAL9Q9UHQ7 104 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 CYTH4Q9UIA0 394 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 ZDHHC2Q9UIJ5 367 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 CDYLQ9Y232 598 aa20.86■□□□□ 0.93
TMEFF1-201ENST00000374879 F5H423 210 aaPredicted RBP20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 GUCY1B2O75343 617 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 KRT75O95678 551 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 TRAP1Q12931 704 aaKnown RBP20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 C6orf10Q5SRN2 563 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 SH3PXD2AQ5TCZ1 1133 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 DENND1BQ6P3S1 775 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 CCDC60Q8IWA6 550 aaPredicted RBP20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 CDKL2Q92772 493 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 SCUBE2Q9NQ36 999 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 SCAF8Q9UPN6 1271 aaKnown RBP20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 RAP2CQ9Y3L5 183 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 RNF103-CHMP3A0A140T963 221 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 EEF1DP29692 281 aaKnown RBP20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 ENPEPQ07075 957 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 DGKZQ13574 1117 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 CYS1Q717R9 158 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 PDZD8Q8NEN9 1154 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 IMPG2Q9BZV3 1241 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 ZNF518BQ9C0D4 1074 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 ADAMTS10Q9H324 1103 aa20.85■□□□□ 0.93
TMEFF1-201ENST00000374879 PIGNO95427 931 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 CPNE6O95741 557 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 RPS6P62753 249 aaKnown RBP20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 IRF9Q00978 393 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 PDK2Q15119 407 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 LRRC8EQ6NSJ5 796 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 TAS1R3Q7RTX0 852 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 COLGALT2Q8IYK4 626 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 CLIP4Q8N3C7 705 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 GABPB2Q8TAK5 448 aaPredicted RBP20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 SOX17Q9H6I2 414 aaPredicted RBP20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 GPN2Q9H9Y4 310 aaPredicted RBP20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 FER1L6Q2WGJ9 1857 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 B4GAT1O43505 415 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 ENDOD1O94919 500 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 ZBTB7AO95365 584 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 HMGCRP04035 888 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 HDCP19113 662 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 NR4A2P43354 598 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 CSE1LP55060 971 aaKnown RBP20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 NSUN2Q08J23 767 aaKnown RBP eCLIP20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 TFDP2Q14188 446 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 PLCL1Q15111 1095 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 PGM5Q15124 567 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 ARL13AQ5H913 290 aaPredicted RBP20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 GLRA4Q5JXX5 417 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 INTS11Q5TA45 600 aaKnown RBP20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 STEAP4Q687X5 459 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 PACRGLQ8N7B6 248 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 FNIP1Q8TF40 1166 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 RNF157Q96PX1 679 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 PCDHGA3Q9Y5H0 932 aa20.84■□□□□ 0.93
TMEFF1-201ENST00000374879 KPNA7A9QM74 516 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 CCNE2O96020 404 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 SPCS2Q15005 226 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 CARTPTQ16568 116 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 ZBTB41Q5SVQ8 909 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 DCLK2Q8N568 766 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 MINDY2Q8NBR6 621 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 LILRB4Q8NHJ6 448 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 RAB2BQ8WUD1 216 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 FAR2Q96K12 515 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 PCDH12Q9NPG4 1184 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 MRPL40Q9NQ50 206 aaKnown RBP20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 AURKCQ9UQB9 309 aa20.83■□□□□ 0.93
TMEFF1-201ENST00000374879 SEC14L2O76054 403 aa20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 CDH5P33151 784 aaPredicted RBP20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 FSTL1Q12841 308 aa20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 RNF19BQ6ZMZ0 732 aa20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 USP33Q8TEY7 942 aa20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 NTPCRQ9BSD7 190 aaKnown RBP20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 TP63Q9H3D4 680 aaPredicted RBP20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 HMG20AQ9NP66 347 aa20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 ZNF277Q9NRM2 450 aaPredicted RBP20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 IFT80Q9P2H3 777 aaPredicted RBP20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 CD300AQ9UGN4 299 aa20.83■□□□□ 0.92
TMEFF1-201ENST00000374879 TPST1O60507 370 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 CST3P01034 146 aaPredicted RBP20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 ERVK-10P10266 1014 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 HLCSP50747 726 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 LRP8Q14114 963 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 MAPRE1Q15691 268 aaKnown RBP20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 FKBP1CQ5VVH2 108 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 FAM83AQ86UY5 434 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 SAMD3Q8N6K7 520 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 SEPT8Q92599 483 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 HOXD1Q9GZZ0 328 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 DHX35Q9H5Z1 703 aaKnown RBP20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 POLE4Q9NR33 117 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 ARMC1Q9NVT9 282 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 BCLAF3A2AJT9 711 aaKnown RBP20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 EEF1B2P24534 225 aaKnown RBP20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 BMPR1AP36894 532 aa20.82■□□□□ 0.92
TMEFF1-201ENST00000374879 OCA2Q04671 838 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms