RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ARHGAP12Q8IWW6 846 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 NUP93Q8N1F7 819 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 IPMKQ8NFU5 416 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 PPP4R1Q8TF05 950 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 AZIN2Q96A70 460 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 BTBD10Q9BSF8 475 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 SLC39A8Q9C0K1 460 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 NMUR2Q9GZQ4 415 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 ZCWPW1Q9H0M4 648 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 IARS2Q9NSE4 1012 aaKnown RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 TMEM216Q9P0N5 145 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 ARMCX1Q9P291 453 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 NEU3Q9UQ49 428 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 FNDC1Q4ZHG4 1894 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 TMEM265A0A087WTH1 108 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 CCDC78A2IDD5 438 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 E9PAM4 449 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 GOLGA8TH3BQL2 631 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 MT-CYBP00156 380 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 PROCP04070 461 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 SERPINE1P05121 402 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 GRK2P25098 689 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 NMBRP28336 390 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 CDK18Q07002 472 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 DSC1Q08554 894 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 PCLAFQ15004 111 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 TIGD7Q6NT04 549 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 TTC7BQ86TV6 843 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 C10orf107Q8IVU9 208 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 COLGALT2Q8IYK4 626 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 CMTR2Q8IYT2 770 aaKnown RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 KLHL23Q8NBE8 558 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 FAM13CQ8NE31 585 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 PIWIL2Q8TC59 973 aaKnown RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 PTCD3Q96EY7 689 aaKnown RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 PRR11Q96HE9 360 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 TBL1YQ9BQ87 522 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 FBXO44Q9H4M3 255 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 TBC1D13Q9NVG8 400 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 MPP6Q9NZW5 540 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 COPG2Q9UBF2 871 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 VCANP13611 3396 aa12.27□□□□□ -0.44
HMGCL-202ENST00000374487 A0A096LPK6 155 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 MPOP05164 745 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 F7P08709 466 aaPredicted RBP12.27□□□□□ -0.45
HMGCL-202ENST00000374487 SLC2A3P11169 496 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 FGF3P11487 239 aaPredicted RBP12.27□□□□□ -0.45
HMGCL-202ENST00000374487 CPA3P15088 417 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 HOXC13P31276 330 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 ABCG1P45844 678 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 GPM6BQ13491 265 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 CAMK1Q14012 370 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 PREPLQ4J6C6 727 aaPredicted RBP12.27□□□□□ -0.45
HMGCL-202ENST00000374487 MANEALQ5VSG8 457 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 PDPK2PQ6A1A2 396 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 ARHGAP18Q8N392 663 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 BCL7CQ8WUZ0 217 aaPredicted RBP12.27□□□□□ -0.45
HMGCL-202ENST00000374487 CLP1Q92989 425 aaKnown RBP12.27□□□□□ -0.45
HMGCL-202ENST00000374487 MCUR1Q96AQ8 359 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 FUBP3Q96I24 572 aaKnown RBP eCLIP12.27□□□□□ -0.45
HMGCL-202ENST00000374487 PPP1R2P1Q96PQ5 205 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 FCRL5Q96RD9 977 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 FSD1LQ9BXM9 530 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 CAB39LQ9H9S4 337 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 GLOD4Q9HC38 313 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 NDFIP2Q9NV92 336 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 RBM22Q9NW64 420 aaKnown RBP eCLIP12.27□□□□□ -0.45
HMGCL-202ENST00000374487 SCML2Q9UQR0 700 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 PCDHB5Q9Y5E4 795 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 HS3ST4Q9Y661 456 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 MTCH2Q9Y6C9 303 aa12.27□□□□□ -0.45
HMGCL-202ENST00000374487 TDRD15B5MCY1 1934 aaKnown RBP12.27□□□□□ -0.45
HMGCL-202ENST00000374487 KCNU1A8MYU2 1149 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 TMEM189-UBE2V1I3L0A0 370 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 ITM2AO43736 263 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 LYPLA1O75608 230 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-202ENST00000374487 WFS1O76024 890 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 SLC34A2O95436 690 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 RALBP11234 206 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 PAPOLAP51003 745 aaKnown RBP12.26□□□□□ -0.45
HMGCL-202ENST00000374487 GEMP55040 296 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 CSE1LP55060 971 aaKnown RBP12.26□□□□□ -0.45
HMGCL-202ENST00000374487 MLLT6P55198 1093 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-202ENST00000374487 POU6F1Q14863 301 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 PCID2Q5JVF3 399 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 WLSQ5T9L3 541 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 RAPH1Q70E73 1250 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGCL-202ENST00000374487 RTL3Q8N8U3 475 aaKnown RBP12.26□□□□□ -0.45
HMGCL-202ENST00000374487 SREK1Q8WXA9 508 aaKnown RBP12.26□□□□□ -0.45
HMGCL-202ENST00000374487 ZNF778Q96MU6 729 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 IL12RB2Q99665 862 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 SIKE1Q9BRV8 207 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 FICDQ9BVA6 458 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 KIFC1Q9BW19 673 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 TLE6Q9H808 572 aa12.26□□□□□ -0.45
HMGCL-202ENST00000374487 ZNF358Q9NW07 568 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms