RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 GLMNQ92990 594 aa12.55□□□□□ -0.4
HDAC8-204ENST00000373560 APOBEC3GQ9HC16 384 aaKnown RBP12.55□□□□□ -0.4
HDAC8-204ENST00000373560 SPASTQ9UBP0 616 aa12.55□□□□□ -0.4
HDAC8-204ENST00000373560 NAV3Q8IVL0 2385 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 LOC101059948A0A1B0GTJ6 334 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 TCP11X1B4DZS4 312 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 C1QTNF3-AMACRE9PGA6 284 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 ZBED1O96006 694 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 FGF3P11487 239 aaPredicted RBP12.54□□□□□ -0.4
HDAC8-204ENST00000373560 PDGFRAP16234 1089 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 CD58P19256 250 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 DLG4P78352 724 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 ALCAMQ13740 583 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 PTK2BQ14289 1009 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 QPCTQ16769 361 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 RILPL1Q5EBL4 403 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 EFHC2Q5JST6 749 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 FAM46CQ5VWP2 391 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 PM20D1Q6GTS8 502 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 ESRP1Q6NXG1 681 aaKnown RBP12.54□□□□□ -0.4
HDAC8-204ENST00000373560 ASB18Q6ZVZ8 466 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 DCP2Q8IU60 420 aaKnown RBP12.54□□□□□ -0.4
HDAC8-204ENST00000373560 CACNA2D3Q8IZS8 1091 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 OR52K2Q8NGK3 314 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 SLC45A3Q96JT2 553 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 CMKLR1Q99788 373 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 IPO11Q9UI26 975 aaKnown RBP12.54□□□□□ -0.4
HDAC8-204ENST00000373560 MAP4K5Q9Y4K4 846 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 B3GALT1Q9Y5Z6 326 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 HS3ST3A1Q9Y663 406 aa12.54□□□□□ -0.4
HDAC8-204ENST00000373560 MRPS18BQ9Y676 258 aaKnown RBP12.54□□□□□ -0.4
HDAC8-204ENST00000373560 IRAK2O43187 625 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 RAD1O60671 282 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 RABIFP47224 123 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 PFN3P60673 137 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 NADK2Q4G0N4 442 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 MS4A13Q5J8X5 152 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 BSPRYQ5W0U4 402 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 KCTD16Q68DU8 428 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 NEK5Q6P3R8 708 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 CHST14Q8NCH0 376 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 CDH19Q9H159 772 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 RDH14Q9HBH5 336 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 KIAA1586Q9HCI6 787 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 OLA1Q9NTK5 396 aaKnown RBP12.53□□□□□ -0.4
HDAC8-204ENST00000373560 GGT7Q9UJ14 662 aa12.53□□□□□ -0.4
HDAC8-204ENST00000373560 KPNA3O00505 521 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-204ENST00000373560 MCF2LO15068 1137 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 ZNF18P17022 549 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 DLG2Q15700 870 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 ACCSLQ4AC99 568 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 MCTP1Q6DN14 999 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 TCTN3Q6NUS6 607 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 C16orf46Q6P387 395 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 SPRED1Q7Z699 444 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 GPBAR1Q8TDU6 330 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 RNF139Q8WU17 664 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 FCRL2Q96LA5 508 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-204ENST00000373560 NT5C1AQ9BXI3 368 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 SLC17A9Q9BYT1 436 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 ITGB1BP2Q9UKP3 347 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 KCNMB2Q9Y691 235 aa12.52□□□□□ -0.41
HDAC8-204ENST00000373560 ATP9BO43861 1147 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 MOCS3O95396 460 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 ASS1P00966 412 aaKnown RBP12.51□□□□□ -0.41
HDAC8-204ENST00000373560 FURINP09958 794 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 IGFALSP35858 605 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 SLC19A1P41440 591 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 SLC11A2P49281 568 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 MMP16P51512 607 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 NEK4P51957 841 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 MSANTD2Q6P1R3 559 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 TMEM135Q86UB9 458 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 XYLT1Q86Y38 959 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 LGI2Q8N0V4 545 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 MMP21Q8N119 569 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 ZNF557Q8N988 423 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-204ENST00000373560 XXYLT1Q8NBI6 393 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 BTN2A2Q8WVV5 523 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 ART4Q93070 314 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 TMEM159Q96B96 161 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 RNF31Q96EP0 1072 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 HEXIM2Q96MH2 286 aaKnown RBP12.51□□□□□ -0.41
HDAC8-204ENST00000373560 NUDT22Q9BRQ3 303 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 LLPHQ9BRT6 129 aaKnown RBP12.51□□□□□ -0.41
HDAC8-204ENST00000373560 GPN2Q9H9Y4 310 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-204ENST00000373560 LUZP4Q9P127 313 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 STK17AQ9UEE5 414 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 ITM2BQ9Y287 266 aa12.51□□□□□ -0.41
HDAC8-204ENST00000373560 ALOX15BO15296 676 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 SORBS2O94875 1100 aaKnown RBP12.5□□□□□ -0.41
HDAC8-204ENST00000373560 MOCS2O96007 188 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-204ENST00000373560 HOXB4P17483 251 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-204ENST00000373560 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
HDAC8-204ENST00000373560 IRAK1P51617 712 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms