RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 SPOCD1Q6ZMY3 1216 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 PLPPR4Q7Z2D5 763 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 PRUNE1Q86TP1 453 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 RALGPS2Q86X27 583 aaPredicted RBP8.36□□□□□ -1.07
GARNL3-201ENST00000373386 RIOX2Q8IUF8 465 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 PHOSPHO2Q8TCD6 241 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 PRPF31Q8WWY3 499 aaKnown RBP8.36□□□□□ -1.07
GARNL3-201ENST00000373386 OMA1Q96E52 524 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 C11orf70Q9BRQ4 267 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 TUBB6Q9BUF5 446 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 MLPHQ9BV36 600 aaPredicted RBP8.36□□□□□ -1.07
GARNL3-201ENST00000373386 DCLRE1BQ9H816 532 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 VRTNQ9H8Y1 702 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 SLCO1B3Q9NPD5 702 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 DTLQ9NZJ0 730 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 MED16Q9Y2X0 877 aa8.36□□□□□ -1.07
GARNL3-201ENST00000373386 FARP1Q9Y4F1 1045 aaPredicted RBP8.36□□□□□ -1.07
GARNL3-201ENST00000373386 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.36□□□□□ -1.07
GARNL3-201ENST00000373386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-201ENST00000373386 SOBPA7XYQ1 873 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 E7ESA3 106 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 PSMD11O00231 422 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 OGTO15294 1046 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 SLC7A4O43246 635 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 HOXC11O43248 304 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-201ENST00000373386 MTSS1O43312 755 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 TYROBPO43914 113 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 CAPNS1P04632 268 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 GLAP06280 429 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 T-ENOLP0DO92 83 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 MARK3P27448 753 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 RPA3P35244 121 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-201ENST00000373386 CDKN2BP42772 138 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 PCP4P48539 62 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 WNT7BP56706 349 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 CAPSQ13938 189 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 DUOXA2Q1HG44 320 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 DALRD3Q5D0E6 543 aaKnown RBP8.35□□□□□ -1.07
GARNL3-201ENST00000373386 CENPUQ71F23 418 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 KLRG1Q96E93 195 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 DDX50Q9BQ39 737 aaKnown RBP8.35□□□□□ -1.07
GARNL3-201ENST00000373386 DHRS4Q9BTZ2 278 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 EPS8L2Q9H6S3 715 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 SMYD2Q9NRG4 433 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 VPS4AQ9UN37 437 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 ERVK-19Q9WJR5 959 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 CLEC11AQ9Y240 323 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 C15orf38-AP3S2A0A0A6YYH1 394 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 A0A0G2JPF8 293 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 SIGLEC16A6NMB1 481 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 HNRNPCL3B7ZW38 293 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 BTN3A1O00481 513 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 BET1O15155 118 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 PIP5K1CO60331 668 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 IL18RAPO95256 599 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 HNRNPCL4P0DMR1 293 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 ITGA2P17301 1181 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 CD58P19256 250 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 EPHB2P29323 1055 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 HOXC12P31275 282 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 GABRB2P47870 512 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 SULT1E1P49888 294 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 SP2Q02086 613 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 ZNF252P-AS1Q0IIN9 211 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 GRSF1Q12849 480 aaKnown RBP eCLIP8.35□□□□□ -1.07
GARNL3-201ENST00000373386 KYAT1Q16773 422 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 TAF1BQ53T94 588 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-201ENST00000373386 FAM205BPQ63HN1 556 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 DNAJC24Q6P3W2 148 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 METTL7BQ6UX53 244 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 OTOAQ7RTW8 1153 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 BNIPLQ7Z465 357 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 PM20D2Q8IYS1 436 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 C4orf33Q8N1A6 199 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 TCAIMQ8N3R3 496 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 AFG1LQ8WV93 481 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 TTC9Q92623 222 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 ACO2Q99798 780 aaKnown RBP8.35□□□□□ -1.07
GARNL3-201ENST00000373386 ASCC2Q9H1I8 757 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-201ENST00000373386 ANKFY1Q9P2R3 1169 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 THEGQ9P2T0 379 aa8.35□□□□□ -1.07
GARNL3-201ENST00000373386 C3orf70A6NLC5 250 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-201ENST00000373386 PI15O43692 258 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 GABBR2O75899 941 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 STAU1O95793 577 aaKnown RBP8.34□□□□□ -1.07
GARNL3-201ENST00000373386 IL1BP01584 269 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 UBTFL6P0CB48 400 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-201ENST00000373386 POU3F4P49335 361 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 ACOT2P49753 483 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 ARSDP51689 593 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 ARSEP51690 589 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 SEC13P55735 322 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 SOX10P56693 466 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 LGALS3BPQ08380 585 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 SLC1A5Q15758 541 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 LSM12Q3MHD2 195 aaKnown RBP8.34□□□□□ -1.07
GARNL3-201ENST00000373386 EFHC2Q5JST6 749 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 NBPF12Q5TAG4 269 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-201ENST00000373386 XKR5Q6UX68 686 aa8.34□□□□□ -1.07
GARNL3-201ENST00000373386 TMPRSS9Q7Z410 1059 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms