RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 NOD1Q9Y239 953 aa12.27□□□□□ -0.44
NCDN-202ENST00000373243 CITO14578 2027 aa12.27□□□□□ -0.44
NCDN-202ENST00000373243 GOLGA8CPA6NN73 597 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 NFKB1P19838 968 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 ME2P23368 584 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 LMO2P25791 158 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 PIK3R1P27986 724 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 OAZ1P54368 228 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 MRPS5P82675 430 aaKnown RBP12.27□□□□□ -0.45
NCDN-202ENST00000373243 ITGADQ13349 1161 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 SLC9B1Q4ZJI4 515 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 LCLAT1Q6UWP7 414 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 CTU1Q7Z7A3 348 aaKnown RBP12.27□□□□□ -0.45
NCDN-202ENST00000373243 ADGRF2Q8IZF7 708 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 PQLC3Q8N755 202 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 BHMTQ93088 406 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 ZFRQ96KR1 1074 aaKnown RBP12.27□□□□□ -0.45
NCDN-202ENST00000373243 ZNF560Q96MR9 790 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 OR52B2Q96RD2 323 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 TMEM79Q9BSE2 394 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 C20orf27Q9GZN8 174 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 TRPV5Q9NQA5 729 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 ITGA11Q9UKX5 1188 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 F8W8V4 182 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 TRAFD1O14545 582 aaPredicted RBP12.27□□□□□ -0.45
NCDN-202ENST00000373243 TIMM44O43615 452 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 TSPAN3O60637 253 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 HMBSP08397 361 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 USP17L7P0C7H9 530 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 GFAPP14136 432 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 STMN1P16949 149 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 NDUFV1P49821 464 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 ZNF423Q2M1K9 1284 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 C4orf22Q6V702 233 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 VASH1Q7L8A9 365 aaPredicted RBP12.27□□□□□ -0.45
NCDN-202ENST00000373243 C11orf74Q86VG3 221 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 CENPSQ8N2Z9 138 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 ATPAF2Q8N5M1 289 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 SHKBP1Q8TBC3 707 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 PDCD6IPQ8WUM4 868 aaKnown RBP12.27□□□□□ -0.45
NCDN-202ENST00000373243 GMLQ99445 158 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 PCYT2Q99447 389 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 FICDQ9BVA6 458 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 OSBPL6Q9BZF3 934 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 WARS2Q9UGM6 360 aaKnown RBP12.27□□□□□ -0.45
NCDN-202ENST00000373243 AP4B1Q9Y6B7 739 aa12.27□□□□□ -0.45
NCDN-202ENST00000373243 ADM5C9JUS6 153 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 CHEK2O96017 543 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 TSHRP16473 764 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 PPARGP37231 505 aaPredicted RBP12.26□□□□□ -0.45
NCDN-202ENST00000373243 TAF6P49848 677 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 ZNF132P52740 706 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 CARTPTQ16568 116 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 CCDC142Q17RM4 750 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 SOWAHAQ2M3V2 549 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 TEDDM1Q5T9Z0 273 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 ZNF470Q6ECI4 717 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 CLVS1Q8IUQ0 354 aaPredicted RBP12.26□□□□□ -0.45
NCDN-202ENST00000373243 CNDP1Q96KN2 507 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 SIGLEC10Q96LC7 697 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 SLC39A3Q9BRY0 314 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 GATA5Q9BWX5 397 aaPredicted RBP12.26□□□□□ -0.45
NCDN-202ENST00000373243 ULBP1Q9BZM6 244 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 SIAEQ9HAT2 523 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 TNFAIP8O95379 198 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 NR2C2P49116 596 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 KPNA2P52292 529 aaKnown RBP12.26□□□□□ -0.45
NCDN-202ENST00000373243 ARL13AQ5H913 290 aaPredicted RBP12.26□□□□□ -0.45
NCDN-202ENST00000373243 POTEHQ6S545 545 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 ZBTB49Q6ZSB9 765 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 PQLC1Q8N2U9 271 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 CPNE1Q99829 537 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 WDR83Q9BRX9 315 aaKnown RBP12.26□□□□□ -0.45
NCDN-202ENST00000373243 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 NXF3Q9H4D5 531 aaKnown RBP12.26□□□□□ -0.45
NCDN-202ENST00000373243 PCDH12Q9NPG4 1184 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 ATP11BQ9Y2G3 1177 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 LGALS2P05162 132 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 FAM58BPP0C7Q3 252 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 YBX3P16989 372 aaKnown RBP eCLIP12.26□□□□□ -0.45
NCDN-202ENST00000373243 PAMP19021 973 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 ETV4P43268 484 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 ACADSBP45954 432 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 RPL14P50914 215 aaKnown RBP12.26□□□□□ -0.45
NCDN-202ENST00000373243 DEPDC1Q5TB30 811 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 GRTP1Q5TC63 336 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 FSTL4Q6MZW2 842 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 XKR5Q6UX68 686 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 PRR23CQ6ZRP0 262 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 TP53INP2Q8IXH6 220 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 FBXW8Q8N3Y1 598 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.26□□□□□ -0.45
NCDN-202ENST00000373243 SLC10A4Q96EP9 437 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 XPR1Q9UBH6 696 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 PCDHGA3Q9Y5H0 932 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 STYXL1Q9Y6J8 313 aa12.26□□□□□ -0.45
NCDN-202ENST00000373243 BCLAF3A2AJT9 711 aaKnown RBP12.25□□□□□ -0.45
NCDN-202ENST00000373243 E7ESA3 106 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms