RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 CDRT15Q96T59 188 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 ZBTB26Q9HCK0 441 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 RRN3Q9NYV6 651 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 RUVBL2Q9Y230 463 aaKnown RBP12.94□□□□□ -0.34
CTPS1-202ENST00000372621 DTNAQ9Y4J8 743 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 MYBPHLA2RUH7 354 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 PDHXO00330 501 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 DLX3O60479 287 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 TADA2AO75478 443 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 F9P00740 461 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 XRCC1P18887 633 aaPredicted RBP12.94□□□□□ -0.34
CTPS1-202ENST00000372621 CEACAM7Q14002 265 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 USP10Q14694 798 aaKnown RBP12.94□□□□□ -0.34
CTPS1-202ENST00000372621 TLR1Q15399 786 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 RASIP1Q5U651 963 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 TMEM198Q66K66 360 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 LRRC8EQ6NSJ5 796 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 BNC2Q6ZN30 1099 aaPredicted RBP12.94□□□□□ -0.34
CTPS1-202ENST00000372621 GPR142Q7Z601 462 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 LINC00523Q86TU6 105 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 PGAM4Q8N0Y7 254 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 PIP4K2CQ8TBX8 421 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 RCN3Q96D15 328 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 DCUN1D1Q96GG9 259 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 ZNF419Q96HQ0 510 aaPredicted RBP12.94□□□□□ -0.34
CTPS1-202ENST00000372621 MAELQ96JY0 434 aaKnown RBP12.94□□□□□ -0.34
CTPS1-202ENST00000372621 EPAS1Q99814 870 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 TKTL2Q9H0I9 626 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 DMAP1Q9NPF5 467 aaPredicted RBP12.94□□□□□ -0.34
CTPS1-202ENST00000372621 RIMS3Q9UJD0 308 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 SLC4A7Q9Y6M7 1214 aa12.94□□□□□ -0.34
CTPS1-202ENST00000372621 PGK1P00558 417 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 ARNTP27540 789 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 GLRBP48167 497 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 ARCN1P48444 511 aaKnown RBP12.93□□□□□ -0.34
CTPS1-202ENST00000372621 MS4A2Q01362 244 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 RBBP5Q15291 538 aaKnown RBP12.93□□□□□ -0.34
CTPS1-202ENST00000372621 GRAMD1BQ3KR37 738 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 PKN3Q6P5Z2 889 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 DPP9Q86TI2 863 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 SLC41A1Q8IVJ1 513 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 CEP97Q8IW35 865 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 PDCD6IPQ8WUM4 868 aaKnown RBP12.93□□□□□ -0.34
CTPS1-202ENST00000372621 SENP8Q96LD8 212 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 ZFP42Q96MM3 310 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 CDYLQ9Y232 598 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 PSMD3O43242 534 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 TREHO43280 583 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 SMIM18P0DKX4 95 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 AVPR1AP37288 418 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 POLD2P49005 469 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 PRPSAP1Q14558 356 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 RFTN1Q14699 578 aaPredicted RBP12.93□□□□□ -0.34
CTPS1-202ENST00000372621 PCID2Q5JVF3 399 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 DENND5AQ6IQ26 1287 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 DCLRE1AQ6PJP8 1040 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 KDM1BQ8NB78 822 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 GCNAQ96QF7 691 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 EPB41L1Q9H4G0 881 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 CACNG4Q9UBN1 327 aa12.93□□□□□ -0.34
CTPS1-202ENST00000372621 GNEQ9Y223 722 aaKnown RBP12.93□□□□□ -0.34
CTPS1-202ENST00000372621 DNAJA2O60884 412 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 ADGRE1Q14246 886 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 ZFP1Q6P2D0 407 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 SPATA22Q8NHS9 363 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 EDEM1Q92611 657 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 CELF6Q96J87 481 aaKnown RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 CATSPER2Q96P56 530 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 XPR1Q9UBH6 696 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 C15orf38-AP3S2A0A0A6YYH1 394 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 CCDC78A2IDD5 438 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 DYNC1LI2O43237 492 aaPredicted RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 SAT1P21673 171 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 RAB10P61026 200 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 FLOT2Q14254 428 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 MFSD10Q14728 455 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 ARHGAP36Q6ZRI8 547 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 ARPINQ7Z6K5 226 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 CCDC117Q8IWD4 279 aaPredicted RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 DENND6AQ8IWF6 608 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 LILRA2Q8N149 483 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 NPLOC4Q8TAT6 608 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 SCYL1Q96KG9 808 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 UBAP1Q9NZ09 502 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 SLC45A1Q9Y2W3 748 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 ACOT9Q9Y305 439 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 AAR2Q9Y312 384 aaKnown RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 COPG1Q9Y678 874 aaKnown RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 TCAF2A6NFQ2 919 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 HAS3O00219 553 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 ACOT8O14734 319 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 LHX1P48742 406 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 CRYBB1P53674 252 aaPredicted RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 MRPS22P82650 360 aaKnown RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 MPP1Q00013 466 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 EIF4EBP2Q13542 120 aaPredicted RBP12.92□□□□□ -0.34
CTPS1-202ENST00000372621 ZNF460Q14592 562 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 UGP2Q16851 508 aa12.92□□□□□ -0.34
CTPS1-202ENST00000372621 ARTNQ5T4W7 220 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms