RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 OR12D3Q9UGF7 316 aa28.82■■■□□ 2.2
SDCCAG3-204ENST00000371725 SLC7A8Q9UHI5 535 aa28.82■■■□□ 2.2
SDCCAG3-204ENST00000371725 HACD1B0YJ81 288 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 GRIA1P42261 906 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 NIPAL4Q0D2K0 466 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 NAB1Q13506 487 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 TUBB3Q13509 450 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 ARL13BQ3SXY8 428 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 TMCO4Q5TGY1 634 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 CCNJLQ8IV13 435 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 PIWIL2Q8TC59 973 aaKnown RBP28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 EMCNQ9ULC0 261 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 FAM92AA1XBS5 289 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 MAGEA13PA6NCF6 341 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 SLC38A8A6NNN8 435 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 CPOXP36551 454 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 AP2B1P63010 937 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 FPGSQ05932 587 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 TEDDM1Q5T9Z0 273 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 NAIF1Q69YI7 327 aaPredicted RBP28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 SPATA17Q96L03 361 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 NR1H4Q96RI1 486 aaPredicted RBP28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 EBF4Q9BQW3 602 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 TRIM62Q9BVG3 475 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 RCOR3Q9P2K3 495 aaPredicted RBP28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 PRKAG2Q9UGJ0 569 aa28.81■■■□□ 2.2
SDCCAG3-204ENST00000371725 GLRA3O75311 464 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 CSPG5O95196 566 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 KLHL2O95198 593 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 GJB5O95377 273 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 MOCS2O96007 188 aaPredicted RBP28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 LINC00271P0C7V0 271 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 ERCC2P18074 760 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 TPI1P60174 286 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 EFEMP1Q12805 493 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 HEATR6Q6AI08 1181 aaKnown RBP28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 KBTBD2Q8IY47 623 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 IFT43Q96FT9 208 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 LGMNQ99538 433 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 DCDC2Q9UHG0 476 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 SOX13Q9UN79 622 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 NUP205Q92621 2012 aa28.8■■■□□ 2.2
SDCCAG3-204ENST00000371725 DCLK1O15075 740 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 AHCYL1O43865 530 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 LRIG2O94898 1065 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 FGF3P11487 239 aaPredicted RBP28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 AIF1P55008 147 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 SMARCB1Q12824 385 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 LRRC8BQ6P9F7 803 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 PPP1R14CQ8TAE6 165 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 C2orf15Q8WU43 125 aaKnown RBP28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 HERC2P3Q9BVR0 1158 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 OXCT2Q9BYC2 517 aaPredicted RBP28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 PRDM16Q9HAZ2 1276 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 EIF2B3Q9NR50 452 aaKnown RBP28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 CHD7Q9P2D1 2997 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 FKBP6O75344 327 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 SRGAP2BP0DMP2 458 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 RABGAP1LQ5R372 815 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 ZCCHC23Q6ZST2 131 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 ADGRG6Q86SQ4 1221 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 ZNF778Q96MU6 729 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 OLFM3Q96PB7 478 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 FAM96AQ9H5X1 160 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 ARHGEF38Q9NXL2 777 aa28.79■■■□□ 2.2
SDCCAG3-204ENST00000371725 A0A0A0MRY4 1105 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 PLIN3O60664 434 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 PAGE1O75459 146 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 RTN3O95197 1032 aaPredicted RBP28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 ALDOAP04075 364 aaKnown RBP28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 RPL10AP62906 217 aaKnown RBP28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 PPIGQ13427 754 aaKnown RBP eCLIP28.78■■■□□ 2.25e-7■■□□□ 13.4
SDCCAG3-204ENST00000371725 INSCQ1MX18 579 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 TMEM240Q5SV17 173 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 AAGABQ6PD74 315 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 PACS1Q6VY07 963 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 DDX53Q86TM3 631 aaKnown RBP28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 NPWQ8N729 165 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 ZNF461Q8TAF7 563 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 TFB1MQ8WVM0 346 aaKnown RBP28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 HTR3CQ8WXA8 447 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 CDKL2Q92772 493 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 ATP2A3Q93084 1043 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 SPATA13Q96N96 652 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 CCSER2Q9H7U1 834 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 PEX19P40855 299 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 SLC1A6P48664 564 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 UBAP2LQ14157 1087 aaKnown RBP28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 MIB1Q86YT6 1006 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 CLPTM1LQ96KA5 538 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 LBHD1Q9BQE6 289 aaPredicted RBP28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 ZBED2Q9BTP6 218 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 CYP4F11Q9HBI6 524 aa28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 SPATS2LQ9NUQ6 558 aaKnown RBP28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.78■■■□□ 2.2
SDCCAG3-204ENST00000371725 A0A088AWK7 358 aa28.77■■■□□ 2.2
SDCCAG3-204ENST00000371725 LCHNA4D1U4 455 aa28.77■■■□□ 2.2
SDCCAG3-204ENST00000371725 ABLIM3O94929 683 aa28.77■■■□□ 2.2
SDCCAG3-204ENST00000371725 TOP3BO95985 862 aaKnown RBP28.77■■■□□ 2.2
SDCCAG3-204ENST00000371725 VAV1P15498 845 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms