RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ABCE1P61221 599 aaKnown RBP11.92□□□□□ -0.5
PDE6C-201ENST00000371447 CUL3Q13618 768 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 SLC9B1Q4ZJI4 515 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 SPDYAQ5MJ70 313 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 STEAP4Q687X5 459 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 CNSTQ6PJW8 725 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 CEP97Q8IW35 865 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 MAPK15Q8TD08 544 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 MYEOVQ96EZ4 313 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 C7orf26Q96N11 449 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 IL22Q9GZX6 179 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 CRISPLD1Q9H336 500 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 CATSPERBQ9H7T0 1116 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 COG4Q9H9E3 785 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 SMPD4Q9NXE4 827 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 SUFUQ9UMX1 484 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 FAM155AB1AL88 458 aaPredicted RBP11.92□□□□□ -0.5
PDE6C-201ENST00000371447 GSTA2P09210 222 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 ACVRL1P37023 503 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 SKIV2L2P42285 1042 aaKnown RBP11.92□□□□□ -0.5
PDE6C-201ENST00000371447 PTDSS1P48651 473 aaKnown RBP11.92□□□□□ -0.5
PDE6C-201ENST00000371447 RBM20Q5T481 1227 aaKnown RBP11.92□□□□□ -0.5
PDE6C-201ENST00000371447 PM20D1Q6GTS8 502 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 SLC24A5Q71RS6 500 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 TAS1R1Q7RTX1 841 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 MAVSQ7Z434 540 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 TMEM135Q86UB9 458 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 MICAL1Q8TDZ2 1067 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 INPP5DQ92835 1189 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 IGSF8Q969P0 613 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 SUSD3Q96L08 255 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 ACE2Q9BYF1 805 aaPredicted RBP11.92□□□□□ -0.5
PDE6C-201ENST00000371447 CSNK1G1Q9HCP0 422 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 GTSE1Q9NYZ3 720 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 TRHDEQ9UKU6 1024 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 LRFN2Q9ULH4 789 aa11.92□□□□□ -0.5
PDE6C-201ENST00000371447 OR1E1P30953 314 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 RAB27AP51159 221 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 COG7P83436 770 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 SCAPQ12770 1279 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 GALNT3Q14435 633 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 NUP93Q8N1F7 819 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 ZNF570Q96NI8 536 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 OR52B2Q96RD2 323 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 GATA5Q9BWX5 397 aaPredicted RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 EIF2B3Q9NR50 452 aaKnown RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 MARCH2Q9P0N8 246 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 XPR1Q9UBH6 696 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 ZNF623O75123 536 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 TOMM70O94826 608 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 TCN1P20061 433 aaPredicted RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 SLC1A2P43004 574 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 GRIA4P48058 902 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 IDH3AP50213 366 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 RIPK1Q13546 671 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 PTPRRQ15256 657 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 SPOUT1Q5T280 376 aaKnown RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 MRPL10Q7Z7H8 261 aaKnown RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 CCNJLQ8IV13 435 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 TDRD5Q8NAT2 981 aaKnown RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 PCSK9Q8NBP7 692 aaKnown RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 PPHLN1Q8NEY8 458 aaKnown RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 SH3TC2Q8TF17 1288 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 LINC01599Q8WXQ3 324 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 ZNF512Q96ME7 567 aaPredicted RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 SAR1AQ9NR31 198 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 RANBP2P49792 3224 aaKnown RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 FAM95CA0A1B0GW59 222 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 SIN3BO75182 1162 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 PIGNO95427 931 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 INHBEP58166 350 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 TAS2R39P59534 338 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 MAPRE1Q15691 268 aaKnown RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 KCTD11Q693B1 232 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 PDPK2PQ6A1A2 396 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 RSPO2Q6UXX9 243 aaPredicted RBP11.91□□□□□ -0.5
PDE6C-201ENST00000371447 BNIPLQ7Z465 357 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 SORT1Q99523 831 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 DSEQ9UL01 958 aa11.91□□□□□ -0.5
PDE6C-201ENST00000371447 TBKBP1A7MCY6 615 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 MTSS1O43312 755 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 TGDSO95455 350 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 JUNP05412 331 aaKnown RBP11.9□□□□□ -0.5
PDE6C-201ENST00000371447 PRSS56P0CW18 603 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 TPBGLP0DKB5 382 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 CNTFP26441 200 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 ARL13AQ5H913 290 aaPredicted RBP11.9□□□□□ -0.5
PDE6C-201ENST00000371447 PPM1LQ5SGD2 360 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 RASIP1Q5U651 963 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 MARC1Q5VT66 337 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 FBXL22Q6P050 247 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 FSTL5Q8N475 847 aaPredicted RBP11.9□□□□□ -0.5
PDE6C-201ENST00000371447 PYDC1Q8WXC3 89 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 CATSPER2Q96P56 530 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 UXTQ9UBK9 157 aaPredicted RBP11.9□□□□□ -0.5
PDE6C-201ENST00000371447 SOX13Q9UN79 622 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 AAR2Q9Y312 384 aaKnown RBP11.9□□□□□ -0.5
PDE6C-201ENST00000371447 TLL2Q9Y6L7 1015 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 KCNU1A8MYU2 1149 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms