RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NR2E3Q9Y5X4 410 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 DGKBQ9Y6T7 804 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 ARHGEF37A1IGU5 675 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 LINC01553A4QN01 128 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TMEM191CA6NGB0 347 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 OR6C75A6NL08 312 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 PRSS47A8MTI9 375 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 E5RJQ4 531 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 H0YGN5 161 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 GOLGA8SH3BPF8 625 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 WNT9AO14904 365 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 PAPSS1O43252 624 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 NCK2O43639 380 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 KIF5CO60282 957 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 PALMO75781 387 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 KRT37O76014 449 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 FGF18O76093 207 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TSPAN15O95858 294 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 AGR2O95994 175 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 ZBED1O96006 694 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CALB1P05937 261 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 POU2F2P09086 479 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 FAM200BP0CF97 657 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CYP2F1P24903 491 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 PTX3P26022 381 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 CFPP27918 469 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 BMP8BP34820 402 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 BMPR1AP36894 532 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 NOP2P46087 812 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 NDUFV1P49821 464 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 BCAT1P54687 386 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 HADHBP55084 474 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 ARPP19P56211 112 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 MAP3K7CLP57077 242 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 RPL7AP62424 266 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 TSPY1Q01534 308 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 OCRLQ01968 901 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 OGDHQ02218 1023 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 BST2Q10589 180 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 ZNF268Q14587 947 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 TAF5Q15542 800 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 USP41Q3LFD5 358 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 LIN9Q5TKA1 542 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CWF19L1Q69YN2 538 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 GPRIN1Q7Z2K8 1008 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 SLFN11Q7Z7L1 901 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 PIGZQ86VD9 579 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 RASSF3Q86WH2 238 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 VPS52Q8N1B4 723 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TTC9BQ8N6N2 239 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 ATAD1Q8NBU5 361 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 JOSD2Q8TAC2 188 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.7□□□□□ -1.82
MCF2-202ENST00000370573 CLEC4CQ8WTT0 213 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 AUTS2Q8WXX7 1259 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 NDRG1Q92597 394 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 C18orf8Q96DM3 657 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 MCRS1Q96EZ8 462 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 PIWIL1Q96J94 861 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 FCRL3Q96P31 734 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 NOX5Q96PH1 765 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 GDF15Q99988 308 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 ZFYVE21Q9BQ24 234 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CLSTN3Q9BQT9 956 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 HERC2P3Q9BVR0 1158 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 UBXN6Q9BZV1 441 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CSNK1G1Q9HCP0 422 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CLEC1BQ9P126 229 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 MTRRQ9UBK8 725 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 ZNF69Q9UC07 566 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 DNAI1Q9UI46 699 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TUBD1Q9UJT1 453 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 HYOU1Q9Y4L1 999 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 BACE2Q9Y5Z0 518 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 PTPRDP23468 1912 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TRANK1O15050 2925 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 MYO7AQ13402 2215 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 C2orf71A6NGG8 1288 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 SIGLEC16A6NMB1 481 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 TMEM110-MUSTN1A8MSY1 372 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 PRRT4C9JH25 899 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 H7C4K7 107 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 XPO1O14980 1071 aaKnown RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 SOAT2O75908 522 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 FTCDO95954 541 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 ATP1A1P05023 1023 aaKnown RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 CD3EP07766 207 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 MYBL1P10243 752 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 DNAJB1P25685 340 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 OR1D2P34982 312 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 RFC1P35251 1148 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 GLUD2P49448 558 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 GPR15P49685 360 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 NAP1L1P55209 391 aaKnown RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 GSCP56915 257 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 GPR17Q13304 367 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 PSMD5Q16401 504 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 RAB6CQ53S08 254 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 SDHAF4Q5VUM1 108 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 OR6B2Q6IFH4 312 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms