RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ACP1P24666 158 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 L1CAMP32004 1257 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 HTR7P34969 479 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 COPB1P53618 953 aaKnown RBP16.45■□□□□ 0.22
VMA21-202ENST00000370361 SNRPD1P62314 119 aaKnown RBP16.45■□□□□ 0.22
VMA21-202ENST00000370361 ARF5P84085 180 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 E2F1Q01094 437 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
VMA21-202ENST00000370361 ZNF211Q13398 564 aaPredicted RBP16.45■□□□□ 0.22
VMA21-202ENST00000370361 CAMK2BQ13554 666 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 TMEM259Q4ZIN3 620 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 C2CD6Q53TS8 623 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 ARTNQ5T4W7 220 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 CCDC183Q5T5S1 534 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 RWDD4Q6NW29 188 aaKnown RBP16.45■□□□□ 0.22
VMA21-202ENST00000370361 FBXL19Q6PCT2 694 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 DHRS13Q6UX07 377 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 LINGO4Q6UY18 593 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 KANSL1Q7Z3B3 1105 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 ABI3BPQ7Z7G0 1075 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 EMC1Q8N766 993 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 GRIN3AQ8TCU5 1115 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 ASB12Q8WXK4 309 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 ARRDC3Q96B67 414 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 PCMTD1Q96MG8 357 aaPredicted RBP16.45■□□□□ 0.22
VMA21-202ENST00000370361 USP29Q9HBJ7 922 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 NLRC4Q9NPP4 1024 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 FANCLQ9NW38 375 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 LHX6Q9UPM6 363 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 GPSM3Q9Y4H4 160 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 SNX10Q9Y5X0 201 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 WASF2Q9Y6W5 498 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 CHD5Q8TDI0 1954 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 KNTC1P50748 2209 aa16.45■□□□□ 0.22
VMA21-202ENST00000370361 NEMP2A6NFY4 417 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 SIGLEC16A6NMB1 481 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 SLC31A1O15431 190 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 TSPAN6O43657 245 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 ZNF821O75541 412 aaPredicted RBP16.44■□□□□ 0.22
VMA21-202ENST00000370361 PLEKP08567 350 aaPredicted RBP16.44■□□□□ 0.22
VMA21-202ENST00000370361 JUPP14923 745 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 CHRNB2P17787 502 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 CCNHP51946 323 aaPredicted RBP16.44■□□□□ 0.22
VMA21-202ENST00000370361 RAD51Q06609 339 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 CDO1Q16878 200 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 CLEC16AQ2KHT3 1053 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 EFHC2Q5JST6 749 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 KYAT3Q6YP21 454 aaKnown RBP16.44■□□□□ 0.22
VMA21-202ENST00000370361 NLRP14Q86W24 1093 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 CHST14Q8NCH0 376 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 FAM172AQ8WUF8 416 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 RFFLQ8WZ73 363 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 ARHGEF2Q92974 986 aaKnown RBP16.44■□□□□ 0.22
VMA21-202ENST00000370361 LENG8Q96PV6 779 aaPredicted RBP16.44■□□□□ 0.22
VMA21-202ENST00000370361 DUSP23Q9BVJ7 150 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 NAT10Q9H0A0 1025 aaKnown RBP16.44■□□□□ 0.22
VMA21-202ENST00000370361 TNKS2Q9H2K2 1166 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 TMPRSS4Q9NRS4 437 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 MYO6Q9UM54 1294 aa16.44■□□□□ 0.22
VMA21-202ENST00000370361 GOLGA4Q13439 2230 aaKnown RBP16.43■□□□□ 0.22
VMA21-202ENST00000370361 TRABD2BA6NFA1 517 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 EIF3CLB5ME19 914 aaKnown RBP16.43■□□□□ 0.22
VMA21-202ENST00000370361 LRIG2O94898 1065 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 POP4O95707 220 aaKnown RBP16.43■□□□□ 0.22
VMA21-202ENST00000370361 CDK11BP21127 795 aaKnown RBP16.43■□□□□ 0.22
VMA21-202ENST00000370361 GPD1P21695 349 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 GLDCP23378 1020 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 RABIFP47224 123 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 HDAC4P56524 1084 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 YBEYP58557 167 aaPredicted RBP16.43■□□□□ 0.22
VMA21-202ENST00000370361 HNRNPKP61978 463 aaKnown RBP eCLIP16.43■□□□□ 0.22
VMA21-202ENST00000370361 UBXN1Q04323 297 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 PTP4A2Q12974 167 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 CCDC157Q569K6 752 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 ZNF805Q5CZA5 627 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 PRAMEF14Q5SWL7 426 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 SLFN11Q7Z7L1 901 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 OR2AP1Q8NGE2 309 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 OR4C6Q8NH72 309 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 SLC30A5Q8TAD4 765 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 VCPIP1Q96JH7 1222 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 EIF3CQ99613 913 aaKnown RBP16.43■□□□□ 0.22
VMA21-202ENST00000370361 SLC17A9Q9BYT1 436 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 NRSN2Q9GZP1 204 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 NCKIPSDQ9NZQ3 722 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 TMEM63CQ9P1W3 806 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 FADS3Q9Y5Q0 445 aa16.43■□□□□ 0.22
VMA21-202ENST00000370361 TRPM6Q9BX84 2022 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 H3BM21 787 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 TOR1BO14657 336 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 KDELR3O43731 214 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 FERP16591 822 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 DNA2P51530 1060 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 SUOXP51687 545 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 ZNF143P52747 638 aaPredicted RBP16.42■□□□□ 0.22
VMA21-202ENST00000370361 BNIP3Q12983 259 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 SGCGQ13326 291 aa16.42■□□□□ 0.22
VMA21-202ENST00000370361 GRM3Q14832 879 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms