RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 RASA4BC9J798 803 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 RASA4O43374 803 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 PRNPP04156 253 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 ZNF883P0CG24 379 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 TCF4P15884 667 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 GEMIN4P57678 1058 aaKnown RBP20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 RACK1P63244 317 aaKnown RBP20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 SLC14A1Q13336 389 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 PARP15Q460N3 678 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 KCNT1Q5JUK3 1230 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 TRIM69Q86WT6 500 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 SNX19Q92543 992 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 HMCESQ96FZ2 354 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 HDAC8Q9BY41 377 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 DHX35Q9H5Z1 703 aaKnown RBP20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 IL36AQ9UHA7 158 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 ANGPTL2Q9UKU9 493 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 TRPM6Q9BX84 2022 aa20.92■□□□□ 0.94
SMNDC1-201ENST00000369592 A0A1W2PR77 199 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 ZSCAN5CA6NGD5 496 aaPredicted RBP20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 FAM47DPA6NHR8 397 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 WNT9AO14904 365 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 GIPC1O14908 333 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 BNIP3LO60238 219 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 OPHN1O60890 802 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 LEFTY1O75610 366 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 GSRP00390 522 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 CEACAM1P13688 526 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 EIF4A3P38919 411 aaKnown RBP20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 CCNHP51946 323 aaPredicted RBP20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 TPI1P60174 286 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 TBX2Q13207 712 aaPredicted RBP20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 KIF19Q2TAC6 998 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 UAP1L1Q3KQV9 507 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 POM121L1PQ3SYA9 428 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 INO80DQ53TQ3 878 aaPredicted RBP20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 ARSIQ5FYB1 569 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 SARM1Q6SZW1 724 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 DBX2Q6ZNG2 339 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 HEPHQ9BQS7 1158 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 PDFQ9HBH1 243 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 PREBQ9HCU5 417 aa20.91■□□□□ 0.94
SMNDC1-201ENST00000369592 SSU72P8A0A1W2PR75 194 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 VILLO15195 856 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 PRPSAP2O60256 369 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 WNT1P04628 370 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 CTSKP43235 329 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 ZNF135P52742 658 aaPredicted RBP20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 NDST2P52849 883 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 ATXN3P54252 364 aaPredicted RBP20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 DPYSQ14117 519 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 PIGHQ14442 188 aaPredicted RBP20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 DPYSL2Q16555 572 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 SLC18A3Q16572 532 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 HLA-BQ31612 363 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 CCDC122Q5T0U0 273 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 N4BP2L1Q5TBK1 243 aaPredicted RBP20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 RFX8Q6ZV50 586 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 ARHGAP12Q8IWW6 846 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 CASKIN2Q8WXE0 1202 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 SLC6A18Q96N87 628 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 IL21RQ9HBE5 538 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 CWC15Q9P013 229 aaKnown RBP20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 HPCAL4Q9UM19 191 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 ANKRD6Q9Y2G4 727 aa20.9■□□□□ 0.94
SMNDC1-201ENST00000369592 TBC1D3DA0A087WVF3 549 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TBC1D3IA0A087WXS9 549 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TBC1D3EA0A087X179 549 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TBC1D3KA0A087X1G2 549 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TBC1D3FA6NER0 549 aaPredicted RBP20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TBC1D3LB9A6J9 549 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 EEF2KO00418 725 aaKnown RBP20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 KPNA3O00505 521 aaPredicted RBP20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TBC1D3HP0C7X1 549 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 ITGB7P26010 798 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 RECQLP46063 649 aaPredicted RBP20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 SLC25A11Q02978 314 aaKnown RBP20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 BOLA3Q53S33 107 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TBC1D3GQ6DHY5 549 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TXNRD3NBQ6F5E7 133 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TBC1D3CQ6IPX1 549 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 PSAPL1Q6NUJ1 521 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 NEK5Q6P3R8 708 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 IL27RAQ6UWB1 636 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 LAYNQ6UX15 382 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 LEKR1Q6ZMV7 388 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 ERN2Q76MJ5 926 aaKnown RBP20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 TBC1D3Q8IZP1 549 aaPredicted RBP20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 OR2AP1Q8NGE2 309 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 LRIG1Q96JA1 1093 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 BTBD6Q96KE9 485 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 NUP85Q9BW27 656 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 DONSONQ9NYP3 566 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 FNDC3AQ9Y2H6 1198 aaKnown RBP20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 SNX11Q9Y5W9 270 aa20.89■□□□□ 0.93
SMNDC1-201ENST00000369592 MFAP3LO75121 409 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 TMCC1O94876 653 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 ERCC2P18074 760 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 PMLP29590 882 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 NUDT1P36639 197 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms