RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 TTC17Q96AE7 1141 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 ZNF419Q96HQ0 510 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-202ENST00000368662 MGME1Q9BQP7 344 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 ARFGAP3Q9NP61 516 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 INTS6Q9UL03 887 aaKnown RBP12.52□□□□□ -0.41
TUBE1-202ENST00000368662 MYO18AQ92614 2054 aaKnown RBP12.51□□□□□ -0.41
TUBE1-202ENST00000368662 AP3B1O00203 1094 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 ARNTLO00327 626 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 AP2A1O95782 977 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 ASLP04424 464 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 CISD3P0C7P0 127 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 SERPINH1P50454 418 aaKnown RBP12.51□□□□□ -0.41
TUBE1-202ENST00000368662 GEMP55040 296 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 NSUN2Q08J23 767 aaKnown RBP eCLIP12.51□□□□□ -0.41
TUBE1-202ENST00000368662 MPP3Q13368 585 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 RALGPS1Q5JS13 557 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 ASTLQ6HA08 431 aaPredicted RBP12.51□□□□□ -0.41
TUBE1-202ENST00000368662 GRAMD4Q6IC98 578 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 FBXO38Q6PIJ6 1188 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 LEKR1Q6ZMV7 388 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 KLHDC8BQ8IXV7 354 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
TUBE1-202ENST00000368662 CSGALNACT1Q8TDX6 532 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 RPP25Q9BUL9 199 aaKnown RBP12.51□□□□□ -0.41
TUBE1-202ENST00000368662 LRRC40Q9H9A6 602 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 XAB2Q9HCS7 855 aaKnown RBP12.51□□□□□ -0.41
TUBE1-202ENST00000368662 GTSE1Q9NYZ3 720 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 HS3ST2Q9Y278 367 aa12.51□□□□□ -0.41
TUBE1-202ENST00000368662 OTOL1A6NHN0 477 aaPredicted RBP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 PPFIA2O75334 1257 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 TMCC1O94876 653 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 CD160O95971 181 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 ATP5BP06576 529 aaKnown RBP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 GJA4P35212 333 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 ARL4CP56559 192 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 ECT2LQ008S8 904 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 EIF4HQ15056 248 aaKnown RBP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 SLC14A2Q15849 920 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 HIF1AQ16665 826 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 ANKRD22Q5VYY1 191 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 MBLAC2Q68D91 279 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 NAPEPLDQ6IQ20 393 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 LINGO4Q6UY18 593 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 LINC00523Q86TU6 105 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 ADIPOR2Q86V24 386 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 PDIK1LQ8N165 341 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 PDCD7Q8N8D1 485 aaKnown RBP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 ATP11CQ8NB49 1132 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 TSEN2Q8NCE0 465 aaKnown RBP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 IMP4Q96G21 291 aaKnown RBP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 TRPV5Q9NQA5 729 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 FAM153AQ9UHL3 310 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 EIF3HO15372 352 aaKnown RBP eCLIP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 TIMM44O43615 452 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 TMEM63AO94886 807 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 SUN1O94901 812 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 MLNP12872 115 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 NNMTP40261 264 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 MAPK8P45983 427 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 NUMBP49757 651 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 RHOAP61586 193 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 CYTH1Q15438 398 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 GAB4Q2WGN9 574 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 KCTD11Q693B1 232 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 PTCRAQ6ISU1 281 aaPredicted RBP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 CENPUQ71F23 418 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 C12orf40Q86WS4 652 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 ISG20Q96AZ6 181 aaKnown RBP12.5□□□□□ -0.41
TUBE1-202ENST00000368662 CEP44Q9C0F1 390 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
TUBE1-202ENST00000368662 TCRBV7S3A2A0A539 114 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 SRPRAP08240 638 aaKnown RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 SERPINF2P08697 491 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 TNNT3P45378 269 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 MAXP61244 160 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 CBLBQ13191 982 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 GEN1Q17RS7 908 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 BEND6Q5SZJ8 279 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 SUGP1Q8IWZ8 645 aaKnown RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 PGBD5Q8N414 524 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 OXNAD1Q96HP4 312 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 RBM15Q96T37 977 aaKnown RBP eCLIP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 SEMA3CQ99985 751 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 GORASP1Q9BQQ3 440 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 SLC8A2Q9UPR5 921 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 UNC80Q8N2C7 3258 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 F5H423 210 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 GOLGA8MH3BSY2 632 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 INSIG1O15503 277 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 MT-CO1P00395 513 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 DLDP09622 509 aaKnown RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 FAM153BP0C7A2 387 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 CR2P20023 1033 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 DHX9Q08211 1270 aaKnown RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 E2F5Q15329 346 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 AAK1Q2M2I8 961 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 FAM153CQ494X1 144 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 FAM182AQ5T1J6 154 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms