RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ADRA1BP35368 520 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 EIF2S3P41091 472 aaKnown RBP16.33■□□□□ 0.2
CKS1B-202ENST00000368436 NEK3P51956 506 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 CLDN2P57739 230 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 FGL2Q14314 439 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 MANEALQ5VSG8 457 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 KIAA1161Q6NSJ0 714 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 DCP2Q8IU60 420 aaKnown RBP16.33■□□□□ 0.2
CKS1B-202ENST00000368436 PLPP6Q8IY26 295 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 SLC22A18ASQ8N1D0 253 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 EMC1Q8N766 993 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 ISG20Q96AZ6 181 aaKnown RBP16.33■□□□□ 0.2
CKS1B-202ENST00000368436 BMFQ96LC9 184 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 BBC3Q96PG8 261 aaPredicted RBP16.33■□□□□ 0.2
CKS1B-202ENST00000368436 CALN1Q9BXU9 219 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 SLC17A9Q9BYT1 436 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 GANQ9H2C0 597 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 METTL5Q9NRN9 209 aaKnown RBP16.33■□□□□ 0.2
CKS1B-202ENST00000368436 NOCTQ9UK39 431 aaKnown RBP16.33■□□□□ 0.2
CKS1B-202ENST00000368436 FADS3Q9Y5Q0 445 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 AK5Q9Y6K8 562 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 A6NNZ2 444 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 PES1O00541 588 aaKnown RBP16.32■□□□□ 0.2
CKS1B-202ENST00000368436 CHRNB2P17787 502 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 MMP8P22894 467 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 CCNHP51946 323 aaPredicted RBP16.32■□□□□ 0.2
CKS1B-202ENST00000368436 RPS21P63220 83 aaKnown RBP16.32■□□□□ 0.2
CKS1B-202ENST00000368436 ATP11AP98196 1134 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 SEMG2Q02383 582 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 CCDC14Q49A88 953 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 RAB6CQ53S08 254 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 Q6ZSR6 202 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 ZSCAN30Q86W11 494 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 DRC7Q8IY82 874 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 SHROOM3Q8TF72 1996 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 SLC20A1Q8WUM9 679 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 RXFP2Q8WXD0 754 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 CRELD1Q96HD1 420 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 FEM1CQ96JP0 617 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 DCBLD2Q96PD2 775 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 RAB6CQ9H0N0 254 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 OSBPL2Q9H1P3 480 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 CAAP1Q9H8G2 361 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 NDFIP2Q9NV92 336 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 OR12D3Q9UGF7 316 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 FCF1Q9Y324 198 aaKnown RBP16.32■□□□□ 0.2
CKS1B-202ENST00000368436 ACTL7AQ9Y615 435 aa16.32■□□□□ 0.2
CKS1B-202ENST00000368436 FASNP49327 2511 aaKnown RBP16.32■□□□□ 0.2
CKS1B-202ENST00000368436 PAK4O96013 591 aaPredicted RBP16.31■□□□□ 0.2
CKS1B-202ENST00000368436 CKMT1AP12532 417 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 ACVRL1P37023 503 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 ETFBP38117 255 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 ABCG1P45844 678 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 MAPKAPK2P49137 400 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 DAB2P98082 770 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 FMO1Q01740 532 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 CDR2Q01850 454 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 C15orf59Q2T9L4 293 aaPredicted RBP16.31■□□□□ 0.2
CKS1B-202ENST00000368436 ARL13BQ3SXY8 428 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 HS1BP3Q53T59 392 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 KYAT3Q6YP21 454 aaKnown RBP16.31■□□□□ 0.2
CKS1B-202ENST00000368436 PARS2Q7L3T8 475 aaKnown RBP16.31■□□□□ 0.2
CKS1B-202ENST00000368436 NLRP14Q86W24 1093 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 FAM181AQ8N9Y4 354 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 SNIP1Q8TAD8 396 aaKnown RBP16.31■□□□□ 0.2
CKS1B-202ENST00000368436 CENPIQ92674 756 aaPredicted RBP16.31■□□□□ 0.2
CKS1B-202ENST00000368436 ARHGEF2Q92974 986 aaKnown RBP16.31■□□□□ 0.2
CKS1B-202ENST00000368436 VOPP1Q96AW1 172 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 LENG8Q96PV6 779 aaPredicted RBP16.31■□□□□ 0.2
CKS1B-202ENST00000368436 TAB2Q9NYJ8 693 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 NLGN3Q9NZ94 848 aa16.31■□□□□ 0.2
CKS1B-202ENST00000368436 POM121BA6NF01 834 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 NEMP2A6NFY4 417 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 C2CD4BA6NLJ0 364 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 SCAMP1O15126 338 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 RAD51BO15315 384 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 FFAR2O15552 330 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 GFPT2O94808 682 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 MT-CO3P00414 261 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 RHOQP17081 205 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 ITPKBP27987 946 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 SDC4P31431 198 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 PTPN9P43378 593 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 DNA2P51530 1060 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 JAM2P57087 298 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 FZD2Q14332 565 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 CDO1Q16878 200 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 CDCP2Q5VXM1 449 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 STRADAQ7RTN6 431 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 JOSD2Q8TAC2 188 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 ENOX1Q8TC92 643 aaKnown RBP16.3■□□□□ 0.2
CKS1B-202ENST00000368436 ASB12Q8WXK4 309 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 APOLD1Q96LR9 279 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 KLF6Q99612 283 aaPredicted RBP16.3■□□□□ 0.2
CKS1B-202ENST00000368436 C1QTNF2Q9BXJ5 285 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 MAGEH1Q9H213 219 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 TMEM248Q9NWD8 314 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 NEU3Q9UQ49 428 aa16.3■□□□□ 0.2
CKS1B-202ENST00000368436 LY6G6EA0A0G2JKS1 128 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms