RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MOGSQ13724 837 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PDGFRLQ15198 375 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 TAB1Q15750 504 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 MAJINQ3KP22 176 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 SLC36A4Q6YBV0 504 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 FKBP9P1Q75LS8 142 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PHYKPLQ8IUZ5 450 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 SPATA4Q8NEY3 305 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 SLC22A17Q8WUG5 538 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 FAM129BQ96TA1 746 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 ANAPC7Q9UJX3 599 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PADI2Q9Y2J8 665 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PNMA8CA0A1B0GUJ8 204 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CBY3A6NI87 242 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 AREL1O15033 823 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 ULK1O75385 1050 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 SMNDC1O75940 238 aaKnown RBP eCLIP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 INSRRP14616 1297 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 RPL9P32969 192 aaKnown RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 NAA20P61599 178 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 BCL2L1Q07817 233 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 RNF151Q2KHN1 245 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PTAR1Q7Z6K3 402 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 FAM124AQ86V42 546 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 REPS2Q8NFH8 660 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 TRAPPC9Q96Q05 1148 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 SLC6A15Q9H2J7 730 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PIGUQ9H490 435 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 COPG2Q9UBF2 871 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 STOML2Q9UJZ1 356 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 NENFQ9UMX5 172 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 C15orf41Q9Y2V0 281 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CASTOR2A6NHX0 329 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 IFI30P13284 250 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 NQO1P15559 274 aaKnown RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 ARF4P18085 180 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PLCG1P19174 1290 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 ENDOUP21128 410 aaKnown RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 SARSP49591 514 aaKnown RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 VEGFBP49765 207 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 NDST1P52848 882 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PURAQ00577 322 aaKnown RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 FOXM1Q08050 763 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 GRIK3Q13003 919 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 LRRC41Q15345 812 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 RBBP7Q16576 425 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PRAMEF19Q5SWL8 479 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 DPPA2Q7Z7J5 298 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CCDC71Q8IV32 467 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 SCUBE1Q8IWY4 988 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 OR8K3Q8NH51 312 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 AGR3Q8TD06 166 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 UBE2E3Q969T4 207 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 REPS1Q96D71 796 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PSD2Q9BQI7 771 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 SYT15Q9BQS2 421 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 VAV3Q9UKW4 847 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CORO1CQ9ULV4 474 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 GIT1Q9Y2X7 761 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 ADGRG1Q9Y653 693 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CAPN14A8MX76 684 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 H7C2Y5 167 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ARVCFO00192 962 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 SIN3BO75182 1162 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PABPC1P11940 636 aaKnown RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 RASA1P20936 1047 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PON1P27169 355 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PIK3R1P27986 724 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PLA2G4AP47712 749 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 RFX3P48380 749 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 SSTP61278 116 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 GPS1Q13098 491 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 MMRN1Q13201 1228 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 TRIQKQ629K1 86 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 MRNIPQ6NTE8 343 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 LINC00523Q86TU6 105 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 SPPL2BQ8TCT7 592 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 IER2Q9BTL4 223 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ADI1Q9BV57 179 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 HEMGNQ9BXL5 484 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PABPC3Q9H361 631 aaKnown RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ALG13Q9NP73 1137 aaKnown RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 UBA2Q9UBT2 640 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 TLL2Q9Y6L7 1015 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 BCL9O00512 1426 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 BAZ2BQ9UIF8 2168 aaKnown RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 A0A087WWV3 80 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PRKAB2O43741 272 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 CCNKO75909 580 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 FAM228BP0C875 321 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 MAPK1P28482 360 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 IGFALSP35858 605 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 GEMP55040 296 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 TBX4P57082 545 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 GPC5P78333 572 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 RGS1Q08116 209 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PDZK1Q5T2W1 519 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 DCLRE1AQ6PJP8 1040 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 CCDC137Q6PK04 289 aaKnown RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 KLHL17Q6TDP4 642 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms