RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 RGS7P49802 495 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 PLK1P53350 603 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 MLLT10P55197 1068 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 PITX1P78337 314 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 STK4Q13043 487 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 CUL4BQ13620 913 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 PDE1CQ14123 709 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 TCEA2Q15560 299 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 ACCSLQ4AC99 568 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 FAM46CQ5VWP2 391 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 NEK5Q6P3R8 708 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 UNC13DQ70J99 1090 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 DSG4Q86SJ6 1040 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 UNC45BQ8IWX7 931 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 GRAMD1CQ8IYS0 662 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 CCAR2Q8N163 923 aaKnown RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 SDR16C5Q8N3Y7 309 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 ZNF557Q8N988 423 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 KIAA0895Q8NCT3 520 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 OR2A12Q8NGT7 310 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 DQX1Q8TE96 717 aaKnown RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 LRRN4Q8WUT4 740 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 TMEM174Q8WUU8 243 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 UBE2Q2Q8WVN8 375 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 TFAP2BQ92481 460 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 HPS1Q92902 700 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 DHX58Q96C10 678 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 EEF2KMTQ96G04 330 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 IPO9Q96P70 1041 aaKnown RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 IL12RB2Q99665 862 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 PRMT1Q99873 361 aaKnown RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 LRRC4Q9HBW1 653 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 NCKIPSDQ9NZQ3 722 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 CGNQ9P2M7 1197 aaKnown RBP8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 ANAPC2Q9UJX6 822 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 NAALADL1Q9UQQ1 740 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 HS3ST3A1Q9Y663 406 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 CACNA1DQ01668 2161 aa8.69□□□□□ -1.02
HMGB1P39-201ENST00000366304 LMO7DNF2Z398 122 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 KPNA3O00505 521 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 IKBKBO14920 756 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 ALOX15BO15296 676 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 KLRC4O43908 158 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 PCDH8O95206 1070 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 MOCS3O95396 460 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 NR3C1P04150 777 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 KRT7P08729 469 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 LIFP15018 202 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 TSHRP16473 764 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 NR1D1P20393 614 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 TACR2P21452 398 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 VAMP7P51809 220 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 PFN3P60673 137 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 CENPCQ03188 943 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 ZFP36L1Q07352 338 aaKnown RBP8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 BST2Q10589 180 aaKnown RBP8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 EIF3IQ13347 325 aaKnown RBP8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 SLC39A14Q15043 492 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 ZC3H12AQ5D1E8 599 aaKnown RBP8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 PRRT3Q5FWE3 981 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 SYPL2Q5VXT5 272 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 KCTD16Q68DU8 428 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 PMF1Q6P1K2 205 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 TAC4Q86UU9 113 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 DCP2Q8IU60 420 aaKnown RBP8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 SIX6OS1Q8N1H7 587 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 SCML4Q8N228 414 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 SH2D3CQ8N5H7 860 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 KCTD13Q8WZ19 329 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 NAT6Q93015 286 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 NKD1Q969G9 470 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 VOPP1Q96AW1 172 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 GFM1Q96RP9 751 aaKnown RBP8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 USP28Q96RU2 1077 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 FEM1AQ9BSK4 669 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 SLC17A9Q9BYT1 436 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 CPEB1Q9BZB8 566 aaKnown RBP8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 MMRN2Q9H8L6 949 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 SIRPGQ9P1W8 387 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 GULP1Q9UBP9 304 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 GGT7Q9UJ14 662 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 LRRK1Q38SD2 2015 aa8.68□□□□□ -1.02
HMGB1P39-201ENST00000366304 A0A1W2PQ27 194 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 A0A1W2PQ64 194 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 A0A1W2PQC6 194 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 IGLON5A6NGN9 336 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 C1QTNF3-AMACRE9PGA6 284 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 H3BM21 787 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 O00370 1275 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 PDZD2O15018 2839 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 SPTLC2O15270 562 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 NKX2-8O15522 239 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 DUX1O43812 170 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 SNAP91O60641 907 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 LTFP02788 710 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 JMJD7P0C870 316 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 SRCP12931 536 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 CCL4P13236 92 aa8.67□□□□□ -1.02
HMGB1P39-201ENST00000366304 ZNF18P17022 549 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms