RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SPSB4Q96A44 273 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 COA7Q96BR5 231 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZDHHC12Q96GR4 267 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 PRR11Q96HE9 360 aaPredicted RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 C3orf30Q96M34 536 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF285Q96NJ3 590 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 WDR24Q96S15 920 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 LRRC4Q9HBW1 653 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 KLHL1Q9NR64 748 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 MTPAPQ9NVV4 582 aaKnown RBP eCLIP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 PIH1D1Q9NWS0 290 aaKnown RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 MAP3K20Q9NYL2 800 aaKnown RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 TUBE1Q9UJT0 475 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 MAPRE3Q9UPY8 281 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 COL15A1P39059 1388 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 PCNX3Q9H6A9 2034 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 A0A087X002 238 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 KCNJ18B7U540 433 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 AGPSO00116 658 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 HAT1O14929 419 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 CLDN14O95500 239 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 DHRS4L1P0CG22 281 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ERVK-10P10266 1014 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ATP2B1P20020 1258 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 C5AR1P21730 350 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 NFKBIAP25963 317 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 SSTR2P30874 369 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ID4P47928 161 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ITGA8P53708 1063 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 HUNKP57058 714 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 RPP30P78346 268 aaKnown RBP0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ADORA2A-AS1P86434 159 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZFP36L1Q07352 338 aaKnown RBP0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZNF155Q12901 538 aaPredicted RBP0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 GAGE5Q13069 117 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 GAGE6Q13070 117 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 GRAPQ13588 217 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ARHGEF7Q14155 803 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 MYBPC2Q14324 1141 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 FAM189A2Q15884 450 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ATP13A5Q4VNC0 1218 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 C2CD6Q53TS8 623 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 TBC1D9BQ66K14 1250 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 GPRIN3Q6ZVF9 776 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 KCTD8Q6ZWB6 473 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 DDX46Q7L014 1031 aaKnown RBP0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 KLBQ86Z14 1044 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 KRTAP13-1Q8IUC0 172 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 TEX45Q8NA69 505 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 TRIM58Q8NG06 486 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 OR6B3Q8NGW1 331 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 STT3BQ8TCJ2 826 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 MRGPRDQ8TDS7 321 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 KBTBD7Q8WVZ9 684 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 OVCA2Q8WZ82 227 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 CPT1BQ92523 772 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 APPBP2Q92624 585 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 TMEM18Q96B42 140 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 OMA1Q96E52 524 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 SCRN2Q96FV2 425 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 SLC35A4Q96G79 324 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ST6GAL2Q96JF0 529 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 LRFN5Q96NI6 719 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 SOSTQ9BQB4 213 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 LRRC61Q9BV99 259 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 PLEKHA5Q9HAU0 1116 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZNF304Q9HCX3 659 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 RXFP3Q9NSD7 469 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZKSCAN7Q9P0L1 754 aaPredicted RBP0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 CTSZQ9UBR2 303 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 EPHA6Q9UF33 1036 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 FBXO40Q9UH90 709 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 SLCO3A1Q9UIG8 710 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 HERC5Q9UII4 1024 aaKnown RBP0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 PCDHB7Q9Y5E2 793 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 CD2APQ9Y5K6 639 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 SNX9Q9Y5X1 595 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 GREB1LQ9C091 1923 aaPredicted RBP0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 TENM1Q9UKZ4 2725 aa0.15□□□□□ -2.39
RNU6-54P-201ENST00000365563 GAKO14976 1311 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 A0A1W2PP11 408 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 A0A1W2PQ67 120 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 hDV102S1A0JD36 115 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 NPIPB5A8MRT5 1133 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 ERVV-1B6SEH8 477 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 NPIPB4C9JG80 1138 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZNF587BE7ETH6 402 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 H7C4K7 107 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 SLC33A1O00400 549 aaPredicted RBP0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 TIMM23O14925 209 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 STRNO43815 780 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 CIDEAO60543 219 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 PDE8AO60658 829 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 RFPL2O75678 378 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 RASSF9O75901 435 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 TMCC1O94876 653 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 VNN2O95498 520 aa0.14□□□□□ -2.39
RNU6-54P-201ENST00000365563 IGHV3-13P01766 116 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms