RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 C1orf162Q8NEQ5 155 aaPredicted RBP5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZNF461Q8TAF7 563 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 SLC35B2Q8TB61 432 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 ATRIPQ8WXE1 791 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 KIFAP3Q92845 792 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 C18orf25Q96B23 403 aaPredicted RBP5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 CHFRQ96EP1 664 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZBTB45Q96K62 511 aaPredicted RBP5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 UROC1Q96N76 676 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 ACO2Q99798 780 aaKnown RBP5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 TCHPQ9BT92 498 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 MRI1Q9BV20 369 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 CCDC94Q9BW85 323 aaPredicted RBP5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 FOXP1Q9H334 677 aaPredicted RBP5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 CYP4F11Q9HBI6 524 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 AKIP1Q9NQ31 210 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 LRWD1Q9UFC0 647 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 FBXL5Q9UKA1 691 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 AJAP1Q9UKB5 411 aaPredicted RBP5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 FBXO4Q9UKT5 387 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 TRHDEQ9UKU6 1024 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 NDRG2Q9UN36 371 aaKnown RBP5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 TNFSF13BQ9Y275 285 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 INSL5Q9Y5Q6 135 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 WDR87Q6ZQQ6 2873 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 EP300Q09472 2414 aaPredicted RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 GVINP1Q7Z2Y8 2422 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ANK1P16157 1881 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 COL4A2P08572 1712 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 A0A087X1B8 175 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ARHGEF37A1IGU5 675 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 SHISA7A6NL88 538 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 H7C4K7 107 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 SLC16A4O15374 487 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 NCAM2O15394 837 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 RAMP2O60895 175 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 NCR1O76036 304 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ABLIM3O94929 683 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 MT-CO1P00395 513 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 MYL4P12829 197 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 MUTP22033 750 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 FCARP24071 287 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 VIPR2P41587 438 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 CCR2P41597 374 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 WASP42768 502 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 CDKN1CP49918 316 aaPredicted RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 CHN2P52757 468 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 SPAG1Q07617 926 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 TWF1Q12792 350 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 MTAPQ13126 283 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 MAPK7Q13164 816 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 DMP1Q13316 513 aaPredicted RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ORC2Q13416 577 aaPredicted RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZRSR1Q15695 479 aaKnown RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 CSRP2Q16527 193 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 LPAL2Q16609 132 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 BEAN1Q3B7T3 259 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZNF528Q3MIS6 628 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 CTXN3Q4LDR2 81 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 XKR4Q5GH76 650 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 FAM78AQ5JUQ0 283 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 FAM102AQ5T9C2 384 aaPredicted RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 AGAP9Q5VTM2 703 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 SLC8B1Q6J4K2 584 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 PGM2L1Q6PCE3 622 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ALKAL1Q6UXT8 129 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZNF852Q6ZMS4 543 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 RTL10Q7L3V2 364 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZNF627Q7L945 461 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 RHOT2Q8IXI1 618 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 DAW1Q8N136 415 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 CBARPQ8N350 705 aaPredicted RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 C4orf32Q8N8J7 132 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 FBXO18Q8NFZ0 1043 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 CLDN23Q96B33 292 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ELSPBP1Q96BH3 223 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 FUBP3Q96I24 572 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 TRMT61BQ9BVS5 477 aaKnown RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZNF768Q9H5H4 540 aaKnown RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 BRD9Q9H8M2 597 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZFP14Q9HCL3 533 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 PTPRHQ9HD43 1115 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 KMT5AQ9NQR1 393 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 SLC38A7Q9NVC3 462 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZSCAN32Q9NX65 697 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 GDE1Q9NZC3 331 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 FAM30AQ9NZY2 134 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 ANKFY1Q9P2R3 1169 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 TUBGCP4Q9UGJ1 667 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 NOL7Q9UMY1 257 aaKnown RBP5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 LIMCH1Q9UPQ0 1083 aa5.6□□□□□ -1.51
RNU4-4P-201ENST00000364588 OTOGLQ3ZCN5 2332 aa5.59□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZNF197O14709 1029 aa5.59□□□□□ -1.51
RNU4-4P-201ENST00000364588 SYN3O14994 580 aa5.59□□□□□ -1.51
RNU4-4P-201ENST00000364588 SUV39H1O43463 412 aa5.59□□□□□ -1.51
RNU4-4P-201ENST00000364588 TBC1D4O60343 1298 aa5.59□□□□□ -1.51
RNU4-4P-201ENST00000364588 MOSPD3O75425 235 aa5.59□□□□□ -1.51
RNU4-4P-201ENST00000364588 OR4Q2P0C623 313 aa5.59□□□□□ -1.51
RNU4-4P-201ENST00000364588 CXCL8P10145 99 aa5.59□□□□□ -1.51
RNU4-4P-201ENST00000364588 MYBL2P10244 700 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms