RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 IZUMO3Q5VZ72 239 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 GRAMD4Q6IC98 578 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 RETSATQ6NUM9 610 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 LEKR1Q6ZMV7 388 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 C12orf40Q86WS4 652 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 TEX26Q8N6G2 289 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 CSGALNACT1Q8TDX6 532 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 AGAP3Q96P47 875 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 HAUS2Q9NVX0 235 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 RSPH14Q9UHP6 348 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 SLC27A6Q9Y2P4 619 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 FAM186AA6NE01 2351 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 HLA-DQB2P05538 268 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 CISD3P0C7P0 127 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 ITIH2P19823 946 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 TNFRSF8P28908 595 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 GJA4P35212 333 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 BASP1P80723 227 aaKnown RBP20.99■□□□□ 0.95
SHISA4-201ENST00000362011 CUL1Q13616 776 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 ZNF235Q14590 738 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 WDR93Q6P2C0 686 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 PCGF5Q86SE9 256 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 TAB3Q8N5C8 712 aaPredicted RBP20.99■□□□□ 0.95
SHISA4-201ENST00000362011 TTC8Q8TAM2 541 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 PARD6BQ9BYG5 372 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 GBA3Q9H227 469 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 NT5MQ9NPB1 228 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 RAB6BQ9NRW1 208 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 DEC1Q9P2X7 70 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 SEPT3Q9UH03 358 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 SLC25A13Q9UJS0 675 aa20.99■□□□□ 0.95
SHISA4-201ENST00000362011 TPX2Q9ULW0 747 aaKnown RBP20.99■□□□□ 0.95
SHISA4-201ENST00000362011 SPTBN4Q9H254 2564 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 DCHS1Q96JQ0 3298 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 CXorf51AA0A1B0GTR3 108 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 SEC31AO94979 1220 aaKnown RBP20.98■□□□□ 0.95
SHISA4-201ENST00000362011 NFKB1P19838 968 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 PSMB4P28070 264 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 EIF2DP41214 584 aaKnown RBP20.98■□□□□ 0.95
SHISA4-201ENST00000362011 SULT2A1Q06520 285 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 GEN1Q17RS7 908 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 PARP6Q2NL67 630 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 CNTD1Q8N815 330 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 FLCNQ8NFG4 579 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 IFT81Q8WYA0 676 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 CINPQ9BW66 212 aaPredicted RBP20.98■□□□□ 0.95
SHISA4-201ENST00000362011 GLOD4Q9HC38 313 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 GRHL1Q9NZI5 618 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 ATP8A1Q9Y2Q0 1164 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 TTLL3Q9Y4R7 772 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 MYLKQ15746 1914 aa20.98■□□□□ 0.95
SHISA4-201ENST00000362011 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.97■□□□□ 0.95
SHISA4-201ENST00000362011 TRIM24O15164 1050 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 METTL18O95568 372 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 POLR2EP19388 210 aaKnown RBP20.97■□□□□ 0.95
SHISA4-201ENST00000362011 CD68P34810 354 aaPredicted RBP20.97■□□□□ 0.95
SHISA4-201ENST00000362011 OPRD1P41143 372 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 SLC6A11P48066 632 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 CARSP49589 748 aaKnown RBP20.97■□□□□ 0.95
SHISA4-201ENST00000362011 ITGA8P53708 1063 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 VSNL1P62760 191 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 KDSRQ06136 332 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 SLC20A2Q08357 652 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 HLTFQ14527 1009 aaKnown RBP eCLIP20.97■□□□□ 0.95
SHISA4-201ENST00000362011 TRADDQ15628 312 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 INO80DQ53TQ3 878 aaPredicted RBP20.97■□□□□ 0.95
SHISA4-201ENST00000362011 FAXCQ5TGI0 409 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 MBLAC2Q68D91 279 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 LINGO4Q6UY18 593 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 METTL3Q86U44 580 aaKnown RBP20.97■□□□□ 0.95
SHISA4-201ENST00000362011 SLC44A3Q8N4M1 653 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 ZNF419Q96HQ0 510 aaPredicted RBP20.97■□□□□ 0.95
SHISA4-201ENST00000362011 FAM129AQ9BZQ8 928 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 ETNK1Q9HBU6 452 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 WNT16Q9UBV4 365 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 ANAPC5Q9UJX4 755 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 RAB21Q9UL25 225 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 ACTL7AQ9Y615 435 aa20.97■□□□□ 0.95
SHISA4-201ENST00000362011 TMCC1O94876 653 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 CD160O95971 181 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 HSPA9P38646 679 aaKnown RBP20.96■□□□□ 0.95
SHISA4-201ENST00000362011 CAV1Q03135 178 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 SEMA5AQ13591 1074 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 PRPSAP1Q14558 356 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 CYTH1Q15438 398 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 PREPLQ4J6C6 727 aaPredicted RBP20.96■□□□□ 0.95
SHISA4-201ENST00000362011 ADIPOR2Q86V24 386 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 PPIL6Q8IXY8 311 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 EIF1ADQ8N9N8 165 aaKnown RBP20.96■□□□□ 0.95
SHISA4-201ENST00000362011 DTWD2Q8NBA8 298 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 DNASE1L2Q92874 299 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 TTC17Q96AE7 1141 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 PPP1R2P1Q96PQ5 205 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 TRPV5Q9NQA5 729 aa20.96■□□□□ 0.95
SHISA4-201ENST00000362011 E7EVH7 732 aa20.95■□□□□ 0.94
SHISA4-201ENST00000362011 F5H423 210 aaPredicted RBP20.95■□□□□ 0.94
SHISA4-201ENST00000362011 ASLP04424 464 aa20.95■□□□□ 0.94
SHISA4-201ENST00000362011 SERPINH1P50454 418 aaKnown RBP20.95■□□□□ 0.94
SHISA4-201ENST00000362011 ECT2LQ008S8 904 aa20.95■□□□□ 0.94
SHISA4-201ENST00000362011 ITKQ08881 620 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 233.8 ms