RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CASTOR2A6NHX0 329 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 DCLK1O15075 740 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 NCAM2O15394 837 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 PDE5AO76074 875 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 APOA4P06727 396 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 HCAR3P49019 387 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 AIF1P55008 147 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 CSE1LP55060 971 aaKnown RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 MSLNQ13421 630 aaPredicted RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 CUL3Q13618 768 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 UPP1Q16831 310 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 SV2CQ496J9 727 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 DCAF6Q58WW2 860 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 RASIP1Q5U651 963 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 HPS6Q86YV9 775 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 OR52K1Q8NGK4 314 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 DPF3Q92784 378 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 TOP1MTQ969P6 601 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 CNDP1Q96KN2 507 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 TNIP3Q96KP6 325 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 FAM193BQ96PV7 902 aaPredicted RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 HNRNPABQ99729 332 aaKnown RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 DUSP16Q9BY84 665 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 MRPL9Q9BYD2 267 aaKnown RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 ILKAPQ9H0C8 392 aaPredicted RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 STAP1Q9ULZ2 295 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 PRPF19Q9UMS4 504 aaKnown RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 PTPRSQ13332 1948 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 RGSL1A5PLK6 1076 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 SLC22A2O15244 555 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 HCRTO43612 131 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 TIMM44O43615 452 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 ZBTB14O43829 449 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 FGBP02675 491 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 C2P06681 752 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 ADSLP30566 484 aaPredicted RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 LILRA4P59901 499 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 WDR5P61964 334 aaKnown RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 DSC1Q08554 894 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 USP4Q13107 963 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 OTUD1Q5VV17 481 aaPredicted RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 AP1ARQ63HQ0 302 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 LPCAT4Q643R3 524 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 NAPRTQ6XQN6 538 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 C16orf59Q7L2K0 433 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 CMC1Q7Z7K0 106 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 PIGZQ86VD9 579 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 TNS4Q8IZW8 715 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 ZNF781Q8N8C0 355 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 RDH11Q8TC12 318 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 KCTD13Q8WZ19 329 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 SERPINI1Q99574 410 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 SPATA16Q9BXB7 569 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 CYP4F11Q9HBI6 524 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 NMRAL1Q9HBL8 299 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 C6orf203Q9P0P8 240 aaPredicted RBP12.6□□□□□ -0.39
UBA3-202ENST00000361055 VPS28Q9UK41 221 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 VANGL2Q9ULK5 521 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 H3BNX3 289 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 EEF2KO00418 725 aaKnown RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 MTSS1O43312 755 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 AP1G1O43747 822 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 CREB3O43889 395 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 DDHD2O94830 711 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 SORBS2O94875 1100 aaKnown RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 FAM163BP0C2L3 166 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 SYN1P17600 705 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 PAX3P23760 479 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 PTPN3P26045 913 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 GSTT1P30711 240 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 SERPINB6P35237 376 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 ADRA1BP35368 520 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 DYNC1I2Q13409 638 aaKnown RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 SLC9B1Q4ZJI4 515 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 INTS6LQ5JSJ4 861 aaKnown RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 KCTD11Q693B1 232 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 PSRC1Q6PGN9 363 aaPredicted RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 OTOP2Q7RTS6 562 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 LCA5Q86VQ0 697 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 ZNF280BQ86YH2 543 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 TDRD5Q8NAT2 981 aaKnown RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 APPL2Q8NEU8 664 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 FAM149B1Q96BN6 582 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 ZNF669Q96BR6 464 aaPredicted RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 LENG8Q96PV6 779 aaPredicted RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 SLC2A13Q96QE2 648 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 MCMBPQ9BTE3 642 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 CEP41Q9BYV8 373 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 DMAP1Q9NPF5 467 aaPredicted RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 OXSMQ9NWU1 459 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 KLHL8Q9P2G9 620 aaPredicted RBP12.59□□□□□ -0.39
UBA3-202ENST00000361055 CACNG4Q9UBN1 327 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 STK39Q9UEW8 545 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 TRHDEQ9UKU6 1024 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 ANKRD6Q9Y2G4 727 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 RAP2CQ9Y3L5 183 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 TBKBP1A7MCY6 615 aa12.59□□□□□ -0.39
UBA3-202ENST00000361055 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms