RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TBC1D3HP0C7X1 549 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 SLC2A3P11169 496 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CHRNA3P32297 505 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 ZCWPW2Q504Y3 356 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TPRG1LQ5T0D9 272 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TBC1D3GQ6DHY5 549 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TBC1D3CQ6IPX1 549 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 GKN2Q86XP6 184 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TBC1D3Q8IZP1 549 aaPredicted RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 APCDD1Q8J025 514 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 C12orf29Q8N999 325 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 ARID3AQ99856 593 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 R3HCC1Q9Y3T6 440 aaKnown RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 PCDHB11Q9Y5F2 797 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 GOLGA8IPA6NC78 632 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 GOLGA8JA6NMD2 632 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 M0QYT0 321 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 FPGTO14772 594 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 KLRC4O43908 158 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CLDN11O75508 207 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 ABL1P00519 1130 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 RNF224P0DH78 156 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 MYF5P13349 255 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 HOXB4P17483 251 aaPredicted RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TACR2P21452 398 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CLCNKAP51800 687 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TKTL1P51854 596 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CDH4P55283 916 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TBX4P57082 545 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 IGFBP7Q16270 282 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CNGA2Q16280 664 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 ZSCAN23Q3MJ62 389 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 C14orf28Q4W4Y0 310 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 ZNF517Q6ZMY9 492 aaPredicted RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CCNJLQ8IV13 435 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CCDC13Q8IYE1 715 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 KYQ8NBH2 561 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 COG1Q8WTW3 980 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CPEB1Q9BZB8 566 aaKnown RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 KCTD5Q9NXV2 234 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 MN1Q10571 1320 aaPredicted RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 SCAMP3O14828 347 aaKnown RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 RAD51BO15315 384 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 ADRB3P13945 408 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CAPN3P20807 821 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 IGFALSP35858 605 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TRIM23P36406 574 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 LEPRP48357 1165 aaKnown RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 CSNK1DP48730 415 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 NFKB2Q00653 900 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 SRSF6Q13247 344 aaKnown RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TSR1Q2NL82 804 aaKnown RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 EDRF1Q3B7T1 1238 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 HDAC11Q96DB2 347 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 MOCOSQ96EN8 888 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 ULBP1Q9BZM6 244 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 RAB33BQ9H082 229 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 ABCG4Q9H172 646 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 RRN3Q9NYV6 651 aa6.1□□□□□ -1.43
CDC42SE2-201ENST00000360515 TYW5A2RUC4 315 aaKnown RBP6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 VPS37CA5D8V6 355 aaPredicted RBP6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 YJEFN3A6XGL0 299 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 E7ENQ6 273 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 HNRNPRO43390 633 aaKnown RBP6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 STX10O60499 249 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 HLA-DRAP01903 254 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 AGAP20933 346 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 HDAC4P56524 1084 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 CENPCQ03188 943 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 MTM1Q13496 603 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 NFATC4Q14934 902 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 RRAGBQ5VZM2 374 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 TMC6Q7Z403 805 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 TMEM110Q86TL2 294 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 SYCP3Q8IZU3 236 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 CXXC4Q9H2H0 198 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 IL36AQ9UHA7 158 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 SLCO3A1Q9UIG8 710 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 SLC25A13Q9UJS0 675 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 IGHV5-10-1A0A0J9YXX1 117 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 SSU72P8A0A1W2PR75 194 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 RAD1O60671 282 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 CBX6O95503 412 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 C9P02748 559 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 ANXA6P08133 673 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 FGF3P11487 239 aaPredicted RBP6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 JUNDP17535 347 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 NNMTP40261 264 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 ACADSBP45954 432 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 FASLGP48023 281 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 METAP1P53582 386 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 YWHAEP62258 255 aaKnown RBP6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 GPLD1P80108 840 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 UGT8Q16880 541 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 RABGAP1LQ5R372 815 aa6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 INTS8Q75QN2 995 aaKnown RBP6.09□□□□□ -1.43
CDC42SE2-201ENST00000360515 TMPRSS9Q7Z410 1059 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms