RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 CCDC28BQ9BUN5 200 aa12.37□□□□□ -0.43
DNMT1-202ENST00000359526 CACNA2D2Q9NY47 1150 aa12.37□□□□□ -0.43
DNMT1-202ENST00000359526 TMEM216Q9P0N5 145 aa12.37□□□□□ -0.43
DNMT1-202ENST00000359526 PRPF19Q9UMS4 504 aaKnown RBP12.37□□□□□ -0.43
DNMT1-202ENST00000359526 DOLKQ9UPQ8 538 aa12.37□□□□□ -0.43
DNMT1-202ENST00000359526 FAM237BA0A1B0GVD1 139 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 TRIM38O00635 465 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ZSCAN5DPP0CG00 497 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PABPC1P11940 636 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ANPEPP15144 967 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ACAT1P24752 427 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 POU1F1P28069 291 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 RPL5P46777 297 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 RIPK1Q13546 671 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 TSNQ15631 228 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ZNF544Q6NX49 715 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ST13P5Q8NFI4 369 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 FNIP1Q8TF40 1166 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PANX3Q96QZ0 392 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CCDC167Q9P0B6 97 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 MTF2Q9Y483 593 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 hCG_1818297A0A087WSY0 165 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ENTPD5O75356 428 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PFKMP08237 780 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CSH1P0DML2 217 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CSH2P0DML3 217 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 YWHAQP27348 245 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 GABRB2P47870 512 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 SERPINH1P50454 418 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CLCN5P51795 746 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 BNIP2Q12982 314 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ITGADQ13349 1161 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 TRIM71Q2Q1W2 868 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 OTUD3Q5T2D3 398 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 KHDRBS2Q5VWX1 349 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 MFSD5Q6N075 450 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PPP4R4Q6NUP7 873 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ISLR2Q6UXK2 745 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 C8orf59Q8N0T1 100 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ZSWIM2Q8NEG5 633 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PYDC1Q8WXC3 89 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CERS2Q96G23 380 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 TSEN34Q9BSV6 310 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ABCC13Q9NSE7 274 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PNMA8BQ9ULN7 279 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CBFA2T3O75081 653 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ADRB2P07550 413 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CAPZA2P47755 286 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 SLC16A1P53985 500 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 TNK2Q07912 1038 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 AADACL2Q6P093 401 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ERAP2Q6P179 960 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CASP12Q6UXS9 341 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 NKAPQ8N5F7 415 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 SLC2A14Q8TDB8 520 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PPP1R16AQ96I34 528 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 REXO2Q9Y3B8 237 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 RAP2CQ9Y3L5 183 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 RPTORQ8N122 1335 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CENPXA8MT69 81 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 LSM1O15116 133 aaKnown RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 HS6ST1O60243 411 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 LTFP02788 710 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PCNAP12004 261 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 GRM3Q14832 879 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 LACTB2Q53H82 288 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-202ENST00000359526 NEPROQ6NW34 567 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 TMEM161BQ8NDZ6 487 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 STAG3L4Q8TBR4 150 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 FAM45AQ8TCE6 357 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 OSMRQ99650 979 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 ARMC7Q9H6L4 198 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PLGRKTQ9HBL7 147 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 MIEF1Q9NQG6 463 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 GALNT8Q9NY28 637 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 PADI4Q9UM07 663 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 NCKAP1Q9Y2A7 1128 aa12.36□□□□□ -0.43
DNMT1-202ENST00000359526 CBX4O00257 560 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 EDF1O60869 148 aaKnown RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 SEC22BO75396 215 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 SNRPB2P08579 225 aaKnown RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 ZNF286BP0CG31 522 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 RPS6KA3P51812 740 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 MRPS22P82650 360 aaKnown RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 TRAF3Q13114 568 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 FAM187BQ17R55 369 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 RGS21Q2M5E4 152 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 CDH24Q86UP0 819 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 TRABD2AQ86V40 505 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.35□□□□□ -0.437e-6■■■□□ 16.3
DNMT1-202ENST00000359526 CAPSLQ8WWF8 208 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 SH3GLB1Q9Y371 365 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 H0YC42 278 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 USP2O75604 605 aaPredicted RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 ALDH1A2O94788 518 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 PGM3O95394 542 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 OR56A5P0C7T3 313 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms