RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 PLD6Q8N2A8 252 aaKnown RBP11.34□□□□□ -0.59
SSU72-202ENST00000359060 NXNL1Q96CM4 212 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 CDRT15Q96T59 188 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 SLC39A8Q9C0K1 460 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 HEATR9A2RTY3 570 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 E5RI56 91 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 SOAT2O75908 522 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 ACADSP16219 412 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 SERPINH1P50454 418 aaKnown RBP11.34□□□□□ -0.59
SSU72-202ENST00000359060 DSG1Q02413 1049 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 TWF1Q12792 350 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 INSCQ1MX18 579 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 RALGPS1Q5JS13 557 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 TEDDM1Q5T9Z0 273 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 ARHGAP18Q8N392 663 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 PPP1R10Q96QC0 940 aaKnown RBP11.34□□□□□ -0.59
SSU72-202ENST00000359060 SIKE1Q9BRV8 207 aa11.34□□□□□ -0.59
SSU72-202ENST00000359060 F5H5T6 163 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 HDAC3O15379 428 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 H2AFYO75367 372 aaKnown RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 GMNNO75496 209 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 RHOBTB1O94844 696 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 CHRNGP07510 517 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 COX4I1P13073 169 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 CACNA2D1P54289 1103 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 RAB10P61026 200 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 ARL13AQ5H913 290 aaPredicted RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 NOMO2Q5JPE7 1267 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 ISLR2Q6UXK2 745 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 BNC2Q6ZN30 1099 aaPredicted RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 IFNEQ86WN2 208 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 NUP93Q8N1F7 819 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 KYQ8NBH2 561 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 RSPH1Q8WYR4 309 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 UTP4Q969X6 686 aaKnown RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 ZNF778Q96MU6 729 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 MIPEPQ99797 713 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 FTHL17Q9BXU8 183 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 MUC3BQ9H195 1237 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 STARD7Q9NQZ5 370 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 LNPEPQ9UIQ6 1025 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 RAD54BQ9Y620 910 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 NCF1BA6NI72 391 aaPredicted RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 NCF1CA8MVU1 366 aaPredicted RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 ZNF487B1APH4 448 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 SUPT3HB4E1H0 165 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 KLF11O14901 512 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 TSPAN3O60637 253 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 SNX2O60749 519 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 SUPT3HO75486 399 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 TBX18O95935 607 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 ALDH2P05091 517 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 NCF1P14598 390 aaPredicted RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 HARS2P49590 506 aaKnown RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 ITGA7Q13683 1181 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 BRMS1LQ5PSV4 323 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.33□□□□□ -0.6
SSU72-202ENST00000359060 ST13P4Q8IZP2 240 aaPredicted RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 CASP10Q92851 521 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 SKA1Q96BD8 255 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 EXOC2Q96KP1 924 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 CDH19Q9H159 772 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 MRPL46Q9H2W6 279 aaKnown RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 EFCAB1Q9HAE3 211 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 TRPC7Q9HCX4 862 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 ANGPTL3Q9Y5C1 460 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 GOLGA4Q13439 2230 aaKnown RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 TRPC5OSA6NMA1 111 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 E9PAM4 449 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 DCLK1O15075 740 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 PAX7P23759 505 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 CRABP2P29373 138 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 IDH3AP50213 366 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 AGKQ53H12 422 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 MRNIPQ6NTE8 343 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 CIR1Q86X95 450 aaPredicted RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 LGI2Q8N0V4 545 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 C3orf58Q8NDZ4 430 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 HDAC10Q969S8 669 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 SEMA3CQ99985 751 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 PRKD2Q9BZL6 878 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 UPF3AQ9H1J1 476 aaKnown RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 ALG9Q9H6U8 611 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 PFDN4Q9NQP4 134 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 TLR8Q9NR97 1041 aaKnown RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 RGS18Q9NS28 235 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 GMIPQ9P107 970 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 UXTQ9UBK9 157 aaPredicted RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 SORCS3Q9UPU3 1222 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 LRCH1Q9Y2L9 728 aa11.33□□□□□ -0.6
SSU72-202ENST00000359060 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.6
SSU72-202ENST00000359060 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
SSU72-202ENST00000359060 CBX4O00257 560 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 IRAK2O43187 625 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 FKBP6O75344 327 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 TM7SF2O76062 418 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 LIPMQ5VYY2 423 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 B3GALT6Q96L58 329 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 EBF2Q9HAK2 575 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms