RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 UNKQ9C0B0 810 aaKnown RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 ZDHHC2Q9UIJ5 367 aa8.72□□□□□ -1.01
RFX3-202ENST00000358730 PRPF19Q9UMS4 504 aaKnown RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 AAR2Q9Y312 384 aaKnown RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 MRPL42Q9Y6G3 142 aaKnown RBP8.72□□□□□ -1.01
RFX3-202ENST00000358730 H3BNX3 289 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 TXNDC9O14530 226 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 AHSGP02765 367 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 JUNP05412 331 aaKnown RBP8.71□□□□□ -1.01
RFX3-202ENST00000358730 TFEBP19484 476 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 GABRB3P28472 473 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 PCSK1P29120 753 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 PAPOLAP51003 745 aaKnown RBP8.71□□□□□ -1.01
RFX3-202ENST00000358730 HK2P52789 917 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 UGP2Q16851 508 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 PCID2Q5JVF3 399 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 PM20D1Q6GTS8 502 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 PKN3Q6P5Z2 889 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 BNC2Q6ZN30 1099 aaPredicted RBP8.71□□□□□ -1.01
RFX3-202ENST00000358730 SPATA6LQ8N4H0 392 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 KYQ8NBH2 561 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 PPHLN1Q8NEY8 458 aaKnown RBP8.71□□□□□ -1.01
RFX3-202ENST00000358730 DQX1Q8TE96 717 aaKnown RBP8.71□□□□□ -1.01
RFX3-202ENST00000358730 STYXQ8WUJ0 223 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 ZNF419Q96HQ0 510 aaPredicted RBP8.71□□□□□ -1.01
RFX3-202ENST00000358730 MARK4Q96L34 752 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 SERPINI1Q99574 410 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 PAAF1Q9BRP4 392 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 FTHL17Q9BXU8 183 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 FAM192AQ9GZU8 254 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 FAM105AQ9NUU6 356 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 FLRT1Q9NZU1 646 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 STK39Q9UEW8 545 aa8.71□□□□□ -1.01
RFX3-202ENST00000358730 FNDC1Q4ZHG4 1894 aaPredicted RBP8.71□□□□□ -1.01
RFX3-202ENST00000358730 FAM95CA0A1B0GW59 222 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 RGSL1A5PLK6 1076 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 PSMD3O43242 534 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 GRID2O43424 1007 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 UQCRBP14927 111 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 BDNFP23560 247 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 DNAJB2P25686 324 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 SCNN1GP51170 649 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 THOP1P52888 689 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 PRKAA2P54646 552 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 RAB10P61026 200 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 XIAPP98170 497 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 DLG1Q12959 904 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 CYLC2Q14093 348 aaPredicted RBP8.71□□□□□ -1.02
RFX3-202ENST00000358730 MMEL1Q495T6 779 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 PAN2Q504Q3 1202 aaKnown RBP8.71□□□□□ -1.02
RFX3-202ENST00000358730 MAP3K21Q5TCX8 1036 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 SDCCAG8Q86SQ7 713 aaPredicted RBP8.71□□□□□ -1.02
RFX3-202ENST00000358730 LCA5Q86VQ0 697 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 ST13P4Q8IZP2 240 aaPredicted RBP8.71□□□□□ -1.02
RFX3-202ENST00000358730 DSELQ8IZU8 1212 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 CCNYL1Q8N7R7 359 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 RCN3Q96D15 328 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 KATNAL1Q9BW62 490 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 ACOT9Q9Y305 439 aa8.71□□□□□ -1.02
RFX3-202ENST00000358730 M0QZ92 97 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 DLX3O60479 287 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ANXA9O76027 345 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 PGK1P00558 417 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CTSHP09668 335 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 STMN1P16949 149 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 SLC1A2P43004 574 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 POLE2P56282 527 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 SEPT6Q14141 434 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 FLOT2Q14254 428 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ZNF470Q6ECI4 717 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ESRP1Q6NXG1 681 aaKnown RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 SETD3Q86TU7 594 aaPredicted RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 CEP97Q8IW35 865 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 MFSD6LQ8IWD5 586 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CNTN4Q8IWV2 1026 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 RP9Q8TA86 221 aaKnown RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 IRGQQ8WZA9 623 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ELMO2Q96JJ3 720 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 FSD1LQ9BXM9 530 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 AP5M1Q9H0R1 490 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 VTI1BQ9UEU0 232 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 NEU3Q9UQ49 428 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 INPP5FQ9Y2H2 1132 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 TMEM233B4DJY2 109 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 SLCO1B7G3V0H7 640 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CASQ2O14958 399 aaPredicted RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 CFLARO15519 480 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 CACNG3O60359 315 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 PMPCBO75439 489 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ZNF865P0CJ78 1059 aaPredicted RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 ODC1P11926 461 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ENO3P13929 434 aaPredicted RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 VCLP18206 1134 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ARNTP27540 789 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 MRPS22P82650 360 aaKnown RBP8.7□□□□□ -1.02
RFX3-202ENST00000358730 ZNF33AQ06730 810 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 NSUN2Q08J23 767 aaKnown RBP eCLIP8.7□□□□□ -1.02
RFX3-202ENST00000358730 TIGD5Q53EQ6 642 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 KDELC2Q7Z4H8 507 aa8.7□□□□□ -1.02
RFX3-202ENST00000358730 ARHGAP12Q8IWW6 846 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms