RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 FBXW8Q8N3Y1 598 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 CCDC89Q8N998 374 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 BANPQ8N9N5 519 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 TERB1Q8NA31 727 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 LEMD2Q8NC56 503 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF420Q8TAQ5 688 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 HM13Q8TCT9 377 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLCO2A1Q92959 643 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 SH3YL1Q96HL8 342 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF347Q96SE7 839 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 SYTL2Q9HCH5 934 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 TRIM39Q9HCM9 518 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 STMN3Q9NZ72 180 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC9A2Q9UBY0 812 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 MARCOQ9UEW3 520 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 GINS2Q9Y248 185 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 KIAA0100Q14667 2235 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ATP6V1G2-DDX39BF2Z307 99 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 TRIM49P0CI25 452 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 TRIM49CP0CI26 452 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 KITP10721 976 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 PCNAP12004 261 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 AOC1P19801 751 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 POU3F3P20264 500 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ITGAXP20702 1163 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 UBA1P22314 1058 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ETV4P43268 484 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 CBX5P45973 191 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 GPLD1P80108 840 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 KCNH2Q12809 1159 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 PDIA2Q13087 525 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ANO4Q32M45 955 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 SEZ6Q53EL9 994 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 NDUFAF5Q5TEU4 345 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ADAMTSL2Q86TH1 951 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 CADM2Q8N3J6 435 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ANKRD49Q8WVL7 239 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 A0A0X1KG70 313 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 WDR64B1ANS9 1081 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 SNAI1O95863 264 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 DBTP11182 482 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 EDNRBP24530 442 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 GPD2P43304 727 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 NAMPTP43490 491 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 HSPA13P48723 471 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 AQP5P55064 265 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 FKBP3Q00688 224 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 PTK6Q13882 451 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 SEL1L2Q5TEA6 688 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 CENPUQ71F23 418 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ADGRG5Q8IZF4 528 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 LRRC71Q8N4P6 559 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 MZB1Q8WU39 189 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 HDAC2Q92769 488 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 TTC17Q96AE7 1141 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 CITED4Q96RK1 184 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 RIT2Q99578 217 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 TMEM79Q9BSE2 394 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 OSBPL11Q9BXB4 747 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 ABHD16BQ9H3Z7 469 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 CCSER2Q9H7U1 834 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 PNPLA3Q9NST1 481 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC8A2Q9UPR5 921 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 AP3M1Q9Y2T2 418 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 PCDHA2Q9Y5H9 948 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 PCDHA10Q9Y5I2 948 aa9.45□□□□□ -0.9
SMARCAL1-202ENST00000358207 A0A0G2JMP0 313 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 FADS2P1A8MWK0 482 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 TK2O00142 265 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 CLDN3O15551 220 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 COMTP21964 271 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 PKLRP30613 574 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 EVI2BP34910 448 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 MSX2P35548 267 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 CLCNKBP51801 687 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 HYIQ5T013 277 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 PLEKHG7Q6ZR37 379 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 RNF180Q86T96 592 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 DPP9Q86TI2 863 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC22A16Q86VW1 577 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 TMEM102Q8N9M5 508 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 MINDY2Q8NBR6 621 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 ABHD11Q8NFV4 315 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 BSNDQ8WZ55 320 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 TOE1Q96GM8 510 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 YME1L1Q96TA2 773 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 HERPUD2Q9BSE4 406 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 C1orf50Q9BV19 199 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 SSU72Q9NP77 194 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 SAYSD1Q9NPB0 183 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 IGSF5Q9NSI5 407 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 PARVAQ9NVD7 372 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 CNTN3Q9P232 1028 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 PCDHB4Q9Y5E5 795 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 NOP56O00567 594 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZMPSTE24O75844 475 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 SCO1O75880 301 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 AKAP3O75969 853 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms