RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PEX5LQ8IYB4 626 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 NSL1Q96IY1 281 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TRIM51Q9BSJ1 452 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 NIFKQ9BYG3 293 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 HIF1ANQ9NWT6 349 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 RHBDL2Q9NX52 303 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ERBB4Q15303 1308 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 MEN1O00255 615 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 GSC2O15499 205 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ASNA1O43681 348 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 USP17L7P0C7H9 530 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF7P17097 686 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ADCYAP1R1P41586 468 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 COPAP53621 1224 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 HSF2Q03933 536 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 NAB2Q15742 525 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 IL27RAQ6UWB1 636 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ENOSF1Q7L5Y1 443 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 OAFQ86UD1 273 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 NLGN4XQ8N0W4 816 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 VANGL1Q8TAA9 524 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 OXER1Q8TDS5 423 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 HERVK_113Q902F9 699 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CENPIQ92674 756 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 RUSC1Q9BVN2 902 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CCSER1Q9C0I3 900 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 BRD7Q9NPI1 651 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 GJB4Q9NTQ9 266 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 LMBRD1Q9NUN5 540 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 SEPT3Q9UH03 358 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CCDC154A6NI56 674 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ZBTB7BO15156 539 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CSTBP04080 98 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ATP1A3P13637 1013 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 PGAM2P15259 253 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 S100A1P23297 94 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CDH11P55287 796 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ACSM2AQ08AH3 577 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 BST2Q10589 180 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 BYSLQ13895 437 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 DUPD1Q68J44 220 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 DENND5AQ6IQ26 1287 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 PGM2L1Q6PCE3 622 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF605Q86T29 641 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 VSTM4Q8IW00 320 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ARMC10Q8N2F6 343 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 MYRIPQ8NFW9 859 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 SMG7Q92540 1137 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 UBXN10Q96LJ8 280 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 MCCC1Q96RQ3 725 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 PTPN18Q99952 460 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 WRAP53Q9BUR4 548 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF518BQ9C0D4 1074 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CST11Q9H112 138 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CYP3A43Q9HB55 503 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 POLMQ9NP87 494 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 COMMD8Q9NX08 183 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 DNAJC28Q9NX36 388 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 PAK5Q9P286 719 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 DMGDHQ9UI17 866 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 GLS2Q9UI32 602 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CD84Q9UIB8 345 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 MED31Q9Y3C7 131 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CROCC2H7BZ55 1655 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CCT8L1PA6NM43 557 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 FFAR3O14843 346 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 GPR42O15529 346 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 TNFRSF21O75509 655 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 GLUD1P00367 558 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 S100A9P06702 114 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 AKR1A1P14550 325 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 MGAT1P26572 445 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CCR1P32246 355 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 TIE1P35590 1138 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 PRCPP42785 496 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 SERPINB9P50453 376 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 RIDAP52758 137 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 DSG1Q02413 1049 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 SLC20A2Q08357 652 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 GALNT3Q14435 633 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 NDUFA9Q16795 377 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 PYDC2Q56P42 97 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 PIK3R6Q5UE93 754 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 SLC35G2Q8TBE7 412 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 KCNJ9Q92806 393 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 SLC25A36Q96CQ1 311 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CMTM5Q96DZ9 223 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 FCRL4Q96PJ5 515 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 TMEM237Q96Q45 408 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 IFT46Q9NQC8 304 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 HCN2Q9UL51 889 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 MTF2Q9Y483 593 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 LOC100506127A0A0U1RQW1 187 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 UBE2QL1A1L167 161 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CPSF4LA6NMK7 179 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 H7C0S8 307 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 CCRL2O00421 344 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 SMAD9O15198 467 aaKnown RBP5.86□□□□□ -1.47
BRCA1-203ENST00000357654 PGLSO95336 258 aa5.86□□□□□ -1.47
BRCA1-203ENST00000357654 PRH1P02810 166 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms