RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PPIL2Q13356 520 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ACAP1Q15027 740 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 TAAR1Q96RJ0 339 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 RUSC1Q9BVN2 902 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 MIR1-1HGQ9H1L0 117 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 TIMM13Q9Y5L4 95 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 DDX3XO00571 662 aaKnown RBP eCLIP11.63□□□□□ -0.555e-26■■■■□ 24.3
SPTBN1-202ENST00000356805 CBWD6Q4V339 395 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ANKRD13AQ8IZ07 590 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 TNKS2Q9H2K2 1166 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 STARD7Q9NQZ5 370 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ZNF221Q9UK13 617 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 GPSM3Q9Y4H4 160 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ANKDD1BA6NHY2 528 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 PSIP1O75475 530 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 IGFBP4P22692 258 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 NTSP30990 170 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 BMPR2Q13873 1038 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 NRF1Q16656 503 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 MARC1Q5VT66 337 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 FAAH2Q6GMR7 532 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 THOC7Q6I9Y2 204 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 USP49Q70CQ1 688 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 EIF3MQ7L2H7 374 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 EEF1AKMT1Q8WVE0 214 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 MTMR8Q96EF0 704 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 SPON1Q9HCB6 807 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 DDX43Q9NXZ2 648 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 MCIDASD6RGH6 385 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 GTPBP1O00178 669 aaKnown RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ZBTB14O43829 449 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 PLOD3O60568 738 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 CYP2A6P11509 494 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ACADLP28330 430 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 CCR1P32246 355 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 ACVR2BQ13705 512 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 SPANXN3Q5MJ09 141 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 N4BP2L1Q5TBK1 243 aaPredicted RBP11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 CES3Q6UWW8 571 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 SYT12Q8IV01 421 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 MAB21L3Q8N8X9 362 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 CGRRF1Q99675 332 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 DAGLAQ9Y4D2 1042 aa11.63□□□□□ -0.55
SPTBN1-202ENST00000356805 SNAPC5O75971 98 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 VDRP11473 427 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 RPL21P46778 160 aaKnown RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 OMPP47874 163 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 THOP1P52888 689 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 TBX4P57082 545 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 MRPS22P82650 360 aaKnown RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 FOLH1Q04609 750 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 OVOS2A0A0J9YW53 1432 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 OVOS2Q6IE36 1432 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 ITSN1Q15811 1721 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 RBAK-RBAKDNI3L0D1 243 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 KPNA3O00505 521 aaPredicted RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 FAM153BP0C7A2 387 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 EML3Q32P44 896 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 FAM153CQ494X1 144 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 MPZL3Q6UWV2 235 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 TPGS1Q6ZTW0 290 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 BHLHE22Q8NFJ8 381 aaPredicted RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 CDADC1Q9BWV3 514 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 EPB41L1Q9H4G0 881 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 REEP1Q9H902 201 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 GPN3Q9UHW5 284 aaPredicted RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 NUDT5Q9UKK9 219 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 RGSL1A5PLK6 1076 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 NFKB1P19838 968 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 ZNF135P52742 658 aaPredicted RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 AP1S2P56377 157 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 GRB14Q14449 540 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 GPSM1Q86YR5 675 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 ZNF655Q8N720 491 aaPredicted RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 RNF148Q8N7C7 305 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 METTL6Q8TCB7 284 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 SUCOQ9UBS9 1254 aaKnown RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 PSMD13Q9UNM6 376 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 CDC42BPAQ5VT25 1732 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 CNTNAP5Q8WYK1 1306 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 RAMP2O60895 175 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 SERPINF2P08697 491 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 ADAM32Q8TC27 787 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 GRIN3AQ8TCU5 1115 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 KLHL32Q96NJ5 620 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 TUBGCP5Q96RT8 1024 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 OGDHLQ9ULD0 1010 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 CAMSAP1Q5T5Y3 1602 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 CLUHO75153 1309 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 STX16-NPEPL1H3BU86 382 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 FOXN3O00409 490 aaPredicted RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 STX16O14662 325 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 DCXO43602 365 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 ENTPD5O75356 428 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 RPL9P32969 192 aaKnown RBP11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 TUBP50607 506 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 SMCO1Q147U7 214 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 ZNF280DQ6N043 979 aa11.62□□□□□ -0.55
SPTBN1-202ENST00000356805 MFSD5Q6N075 450 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms