RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 VEGFAP15692 232 aaPredicted RBP6.54□□□□□ -1.36
UPF2-201ENST00000356352 NPR3P17342 541 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 GPD2P43304 727 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 ARHGDIBP52566 201 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 UGT2B15P54855 530 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 AIF1P55008 147 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 INHBEP58166 350 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 DPYSL3Q14195 570 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 KLHL35Q6PF15 583 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 CXXC5Q7LFL8 322 aaKnown RBP6.54□□□□□ -1.36
UPF2-201ENST00000356352 TMC3Q7Z5M5 1100 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 HEATR4Q86WZ0 1026 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 SNX32Q86XE0 403 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 ARMC8Q8IUR7 673 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 ARHGEF19Q8IW93 802 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 PHC3Q8NDX5 983 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 RP9Q8TA86 221 aaKnown RBP6.54□□□□□ -1.36
UPF2-201ENST00000356352 SPATA13Q96N96 652 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 SLC9A7Q96T83 725 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 COQ7Q99807 217 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 ASAH2Q9NR71 780 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 UBAP1Q9NZ09 502 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 POLLQ9UGP5 575 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 TBC1D30Q9Y2I9 924 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 ACTL7BQ9Y614 415 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 C1orf232A0A0U1RR37 186 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 OR10H2O60403 315 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 CYP3A4P08684 503 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 MYL9P24844 172 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 UGT1A5P35504 534 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 RARRES1P49788 294 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 RAB2AP61019 212 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 NR1D2Q14995 579 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 KCNT2Q6UVM3 1135 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 NET1Q7Z628 596 aaPredicted RBP6.54□□□□□ -1.36
UPF2-201ENST00000356352 AHI1Q8N157 1196 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 ACMSDQ8TDX5 336 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 PIK3R5Q8WYR1 880 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 TATDN2Q93075 761 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 TTLL2Q9BWV7 592 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 NUAK2Q9H093 628 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 GDF3Q9NR23 364 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 GGA2Q9UJY4 613 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 NRCAMQ92823 1304 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 LMTK2Q8IWU2 1503 aa6.54□□□□□ -1.36
UPF2-201ENST00000356352 H3BNH8 94 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 H3BQF6 201 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 PECAM1P16284 738 aaPredicted RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 ADORA2AP29274 412 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 GPR1P46091 355 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 CCR3P51677 355 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 ATP6V0D1P61421 351 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 BNC1Q01954 994 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 RHAGQ02094 409 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 TCHHL1Q5QJ38 904 aaPredicted RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 NEPROQ6NW34 567 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 IRGCQ6NXR0 463 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 USP50Q70EL3 339 aaPredicted RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 CLVS1Q8IUQ0 354 aaPredicted RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 OMA1Q96E52 524 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 PTCD3Q96EY7 689 aaKnown RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 MPP4Q96JB8 637 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 HSFY1Q96LI6 401 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 ZYG11BQ9C0D3 744 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 ARHGAP20Q9P2F6 1191 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 SLC27A6Q9Y2P4 619 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 CLUHO75153 1309 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 TBC1D3BA6NDS4 549 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 SLIT1O75093 1534 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 SERPINB7O75635 380 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 NFKB1P19838 968 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 ATP5F1P24539 256 aaPredicted RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 ACAT1P24752 427 aaKnown RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 POLD2P49005 469 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 FKBP1CQ5VVH2 108 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 BROXQ5VW32 411 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 ADAMTSL2Q86TH1 951 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 CDH24Q86UP0 819 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 TRPV3Q8NET8 790 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 UBASH3BQ8TF42 649 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 ZNF75CPQ92670 426 aaPredicted RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 REXO5Q96IC2 774 aaKnown RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 ZNF607Q96SK3 696 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 ZNF214Q9UL59 606 aaPredicted RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 TNFSF13BQ9Y275 285 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 OR10H1Q9Y4A9 318 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 DIP2AQ14689 1571 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 SIGLEC16A6NMB1 481 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 TPP1O14773 563 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 SNAP91O60641 907 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 OTCP00480 354 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 IFNGP01579 166 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 ABHD2P08910 425 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 PTPN1P18031 435 aaKnown RBP6.53□□□□□ -1.36
UPF2-201ENST00000356352 KELP23276 732 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 KDELR1P24390 212 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 MIPP30301 263 aa6.53□□□□□ -1.36
UPF2-201ENST00000356352 RPL21P46778 160 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms