RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 HNMTP50135 292 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 USP10Q14694 798 aaKnown RBP6.91□□□□□ -1.3
NF1-201ENST00000356175 GRIK4Q16099 956 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 FAM98BQ52LJ0 330 aaKnown RBP6.91□□□□□ -1.3
NF1-201ENST00000356175 GK5Q6ZS86 529 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 OR5H6Q8NGV6 325 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 LRTOMTQ8WZ04 291 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 COA7Q96BR5 231 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.91□□□□□ -1.3
NF1-201ENST00000356175 C9JVG2 144 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 PTPREP23469 700 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 MTHFRP42898 656 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 HLFQ16534 295 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 CLEC16AQ2KHT3 1053 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 TMEM121Q9BTD3 319 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 ALG2Q9H553 416 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 TBCCD1Q9NVR7 557 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 STAP2Q9UGK3 403 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.91□□□□□ -1.39e-7■■■■■ 34.8
NF1-201ENST00000356175 H7C1W4 665 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 GGPS1O95749 300 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 CDH13P55290 713 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 AUHQ13825 339 aaKnown RBP6.91□□□□□ -1.3
NF1-201ENST00000356175 HYAL4Q2M3T9 481 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 C1orf189Q5VU69 101 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 BICRALQ6AI39 1079 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 TBC1D10CQ8IV04 446 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 SLC37A3Q8NCC5 494 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 UCK2Q9BZX2 261 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 TMEM168Q9H0V1 697 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 CCDC167Q9P0B6 97 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 FRMPD4Q14CM0 1322 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 CCNDBP1O95273 360 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 ST3GAL1Q11201 340 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 APOPT1Q96IL0 206 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 CYB5R1Q9UHQ9 305 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 ZNF223Q9UK11 482 aaPredicted RBP6.91□□□□□ -1.3
NF1-201ENST00000356175 UBA6A0AVT1 1052 aaPredicted RBP6.91□□□□□ -1.3
NF1-201ENST00000356175 ECE2O60344 883 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 TXNRD1Q16881 649 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 KLHDC7AQ5VTJ3 777 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 RAB12Q6IQ22 244 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 AMIGO1Q86WK6 493 aa6.91□□□□□ -1.3
NF1-201ENST00000356175 PPIL3Q9H2H8 161 aaKnown RBP6.91□□□□□ -1.3
NF1-201ENST00000356175 ZNFX1Q9P2E3 1918 aaKnown RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 ABCA4P78363 2273 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 FADS2P1A8MWK0 482 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 AGPSO00116 658 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 BIRC5O15392 142 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 PRPF4O43172 522 aaKnown RBP eCLIP6.9□□□□□ -1.32e-6■■■■□ 26.6
NF1-201ENST00000356175 TOXO94900 526 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 CYP3A4P08684 503 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 NFYCQ13952 458 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 SKIV2LQ15477 1246 aaKnown RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 XKR9Q5GH70 373 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 CLNKQ7Z7G1 428 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 AMER2Q8N7J2 671 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 APOL5Q9BWW9 433 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 THAP2Q9H0W7 228 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 MRPL47Q9HD33 250 aaKnown RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 THAP1Q9NVV9 213 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 SLC30A1Q9Y6M5 507 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 NUP153P49790 1475 aaKnown RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 MAGI1Q96QZ7 1491 aaPredicted RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 KATNA1O75449 491 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 PENKP01210 267 aaPredicted RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 SFT2D3Q587I9 215 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 BRDTQ58F21 947 aaPredicted RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 ZNF648Q5T619 568 aaPredicted RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 LCN1P1Q5VSP4 162 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 SEZ6LQ9BYH1 1024 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 CRISPLD1Q9H336 500 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 UBE2Q2LH0YL09 131 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 AP3D1O14617 1153 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 KPNA5O15131 536 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 CLIC3O95833 236 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 GUCA1CO95843 209 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 ATF3P18847 181 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 TDGQ13569 410 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 CLINT1Q14677 625 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 CXorf57Q6NSI4 855 aaKnown RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 STOX1Q6ZVD7 989 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 ZNF276Q8N554 614 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 SLC15A4Q8N697 577 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 CDYL2Q8N8U2 506 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 WDR48Q8TAF3 677 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 VAV3Q9UKW4 847 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 CNTNAP2Q9UHC6 1331 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 PTPRTO14522 1441 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 RBL1P28749 1068 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 MAGEA11P43364 429 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 NDUFAF5Q5TEU4 345 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 SLC25A24Q6NUK1 477 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 ILDR1Q86SU0 546 aaPredicted RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 HERC6Q8IVU3 1022 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 EMC1Q8N766 993 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 GTPBP2Q9BX10 602 aaKnown RBP6.9□□□□□ -1.3
NF1-201ENST00000356175 DCLK3Q9C098 648 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 MAGEF1Q9HAY2 307 aa6.9□□□□□ -1.3
NF1-201ENST00000356175 OSGEPQ9NPF4 335 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms