RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ZBTB49Q6ZSB9 765 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 OTOP3Q7RTS5 596 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 OFCC1Q8IZS5 231 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 CENPLQ8N0S6 344 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 AGBL3Q8NEM8 1001 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 SPATA22Q8NHS9 363 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 DDI1Q8WTU0 396 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 PHF21BQ96EK2 531 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 RMND5BQ96G75 393 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 MLPHQ9BV36 600 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 CHST12Q9NRB3 414 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 SNTG2Q9NY99 539 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 GJD2Q9UKL4 321 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 V9GYQ6 96 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 TMEM114B3SHH9 223 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 BEST1O76090 585 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 SLC35E2BP0CK96 405 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 CCDC166P0CW27 439 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 INSRRP14616 1297 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 YWHAQP27348 245 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 NSUN2Q08J23 767 aaKnown RBP eCLIP10.27□□□□□ -0.76
PTPRA-203ENST00000356147 CYS1Q717R9 158 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 FASTKD5Q7L8L6 764 aaKnown RBP10.27□□□□□ -0.76
PTPRA-203ENST00000356147 FIBCD1Q8N539 461 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 NPWQ8N729 165 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 CATSPER1Q8NEC5 780 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 HMGCLL1Q8TB92 370 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 CANT1Q8WVQ1 401 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 TSNARE1Q96NA8 513 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 NAA50Q9GZZ1 169 aaKnown RBP10.27□□□□□ -0.76
PTPRA-203ENST00000356147 TIMMDC1Q9NPL8 285 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 CACNG4Q9UBN1 327 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 ADAMTS5Q9UNA0 930 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 MYRFQ9Y2G1 1151 aa10.27□□□□□ -0.76
PTPRA-203ENST00000356147 IGKV6-21A0A0C4DH24 114 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 H3BNH8 94 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 I6L893 689 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 EEF2KO00418 725 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 TRIM38O00635 465 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 FBP2O00757 339 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 XPOTO43592 962 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 JCHAINP01591 159 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 AHSGP02765 367 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 IMPDH2P12268 514 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 ZNF23P17027 643 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 ERCC2P18074 760 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 KCNA5P22460 613 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 AKAP5P24588 427 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 ATICP31939 592 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 C1QTNF8P60827 252 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 PRKAA1Q13131 559 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 TNFAIP1Q13829 316 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 TRIM25Q14258 630 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 TSTD2Q5T7W7 516 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 CLEC6AQ6EIG7 209 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 C4orf22Q6V702 233 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 ZYG11AQ6WRX3 759 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 MFSD6LQ8IWD5 586 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 TXNDC5Q8NBS9 432 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 GIPC3Q8TF64 312 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 CNDP1Q96KN2 507 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 ARMC7Q9H6L4 198 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 PRDM16Q9HAZ2 1276 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 FZD10Q9ULW2 581 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 SDHDO14521 159 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 HTRA2O43464 458 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 MT-CYBP00156 380 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 PGK1P00558 417 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 MPOP05164 745 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 IGFBP6P24592 240 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 TKTP29401 623 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 CD68P34810 354 aaPredicted RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 MAGEA12P43365 314 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 SLC7A2P52569 658 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 RPL26P61254 145 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 PRPSAP1Q14558 356 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 OGFOD2Q6N063 350 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 ELMSAN1Q6PJG2 1045 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 CHSY3Q70JA7 882 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 TMEM135Q86UB9 458 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 PSTKQ8IV42 348 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 KDM1BQ8NB78 822 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 C1QTNF1Q9BXJ1 281 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 PAIP1Q9H074 479 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 OSBPL2Q9H1P3 480 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 TUT1Q9H6E5 874 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 AS3MTQ9HBK9 375 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 PIGVQ9NUD9 493 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 SLC2A6Q9UGQ3 507 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 CNOT6Q9ULM6 557 aaKnown RBP10.27□□□□□ -0.77
PTPRA-203ENST00000356147 PTGDR2Q9Y5Y4 395 aa10.27□□□□□ -0.77
PTPRA-203ENST00000356147 SIP14410 1827 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 DDHD2O94830 711 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 ZNF286BP0CG31 522 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 CD247P20963 164 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 OAZ1P54368 228 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 CBLBQ13191 982 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 LAMC2Q13753 1193 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms