RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 DAAM2Q86T65 1068 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 ZDHHC17Q8IUH5 632 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 ARID3BQ8IVW6 561 aaPredicted RBP7.23□□□□□ -1.25
VPS13A-201ENST00000355766 MCOLN2Q8IZK6 566 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 UBL4BQ8N7F7 174 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 NIPA2Q8N8Q9 360 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 C3orf20Q8ND61 904 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 ACTRT1Q8TDG2 376 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 BPIFB1Q8TDL5 484 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 ZNF606Q8WXB4 792 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 ZNF653Q96CK0 615 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 CHFRQ96EP1 664 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 TMEM176AQ96HP8 235 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 OSBPL9Q96SU4 736 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 PCDHB18PQ96TA0 734 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 NCAPGQ9BPX3 1015 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 SELENOOQ9BVL4 669 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 NT5C1AQ9BXI3 368 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 LRRC3Q9BY71 257 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 THAP2Q9H0W7 228 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 PDCL3Q9H2J4 239 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 SEPT11Q9NVA2 429 aaKnown RBP7.23□□□□□ -1.25
VPS13A-201ENST00000355766 PARVAQ9NVD7 372 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 POLR3BQ9NW08 1133 aaPredicted RBP7.23□□□□□ -1.25
VPS13A-201ENST00000355766 CTTNBP2NLQ9P2B4 639 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 VTI1BQ9UEU0 232 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 GPR160Q9UJ42 338 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 AGAP1Q9UPQ3 857 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 ZNF281Q9Y2X9 895 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 DUSP10Q9Y6W6 482 aa7.23□□□□□ -1.25
VPS13A-201ENST00000355766 CCDC188H7C350 402 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 O00370 1275 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 PODXLO00592 558 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 TRDMT1O14717 391 aaKnown RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 PSTPIP1O43586 416 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 BUB1BO60566 1050 aaPredicted RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 CLSTN1O94985 981 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 EGFP01133 1207 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 WARSP23381 471 aaKnown RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 CTNNA2P26232 953 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 CTNNA1P35221 906 aaKnown RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 RDXP35241 583 aaKnown RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 PAFAH1B1P43034 410 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 NOP2P46087 812 aaKnown RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 GALK1P51570 392 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 RAD23BP54727 409 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 CHRNEQ04844 493 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 SEMA3BQ13214 749 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 PLD1Q13393 1074 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 PWP1Q13610 501 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 DMC1Q14565 340 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 FBXO43Q4G163 708 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 TRIM61Q5EBN2 209 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 LCLAT1Q6UWP7 414 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 SYT13Q7L8C5 426 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 NT5DC3Q86UY8 548 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 CRYBG2Q8N1P7 616 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 RASGEF1CQ8N431 466 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 CHCHD4Q8N4Q1 142 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 ANKS4BQ8N8V4 417 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 EIF1ADQ8N9N8 165 aaKnown RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 SLC4A11Q8NBS3 891 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 RPLP0P6Q8NHW5 317 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 ZNF564Q8TBZ8 553 aaPredicted RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 IPO4Q8TEX9 1081 aaKnown RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 ANKRD7Q92527 254 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 PKNOX2Q96KN3 472 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 TNIP3Q96KP6 325 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 ZMAT2Q96NC0 199 aaKnown RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 G6PC3Q9BUM1 346 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 NUP85Q9BW27 656 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 KRTAP4-2Q9BYR5 136 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 SMYD3Q9H7B4 428 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 TMEM51Q9NW97 253 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 ARGLU1Q9NWB6 273 aaPredicted RBP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 TAS2R14Q9NYV8 317 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 ADAM22Q9P0K1 906 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 AMFRQ9UKV5 643 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 DSEQ9UL01 958 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS13A-201ENST00000355766 ADAMTS20P59510 1910 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 MYH10P35580 1976 aa7.22□□□□□ -1.25
VPS13A-201ENST00000355766 KIF26AQ9ULI4 1882 aaPredicted RBP7.21□□□□□ -1.25
VPS13A-201ENST00000355766 CYSRT1A8MQ03 144 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 NOTOA8MTQ0 251 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 KPNA7A9QM74 516 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 MYO1FO00160 1098 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 PGRMC1O00264 195 aaKnown RBP7.21□□□□□ -1.26
VPS13A-201ENST00000355766 RGS13O14921 159 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 BUB1O43683 1085 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 PSPNO60542 156 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 HUS1O60921 280 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 VNN2O95498 520 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 FGF19O95750 216 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 ERBB2P04626 1255 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 DESP17661 470 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 ENGP17813 658 aa7.21□□□□□ -1.26
VPS13A-201ENST00000355766 ABCB4P21439 1286 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms