RNA–Protein interactions for RNA: ENST00000355216.5

FOXN4-202, Transcript of forkhead box N4, humanhuman

TSL 2 BASIC

Gene FOXN4, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-202ENST00000355216 CNTN4Q8IWV2 1026 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 SH3TC2Q8TF17 1288 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 STN1Q9H668 368 aaKnown RBP13.8□□□□□ -0.2
FOXN4-202ENST00000355216 DNAJC28Q9NX36 388 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 IL37Q9NZH6 218 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 TLK1Q9UKI8 766 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 APOBEC2Q9Y235 224 aaKnown RBP13.8□□□□□ -0.2
FOXN4-202ENST00000355216 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 CASP8AP2Q9UKL3 1982 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 SYN3O14994 580 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 ALOX15P16050 662 aaPredicted RBP13.8□□□□□ -0.2
FOXN4-202ENST00000355216 USP4Q13107 963 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 MRPL58Q14197 206 aaKnown RBP13.8□□□□□ -0.2
FOXN4-202ENST00000355216 CCDC117Q8IWD4 279 aaPredicted RBP13.8□□□□□ -0.2
FOXN4-202ENST00000355216 UMODL1-AS1Q8N2C9 162 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 ARHGAP18Q8N392 663 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 ZNF781Q8N8C0 355 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 WDR60Q8WVS4 1066 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 KLHL5Q96PQ7 755 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 TASP1Q9H6P5 420 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.8□□□□□ -0.2
FOXN4-202ENST00000355216 SPECC1L-ADORA2AF8WAN1 911 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 SBK3P0C264 359 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 HAPLN1P10915 354 aaPredicted RBP13.8□□□□□ -0.2
FOXN4-202ENST00000355216 RHOQP17081 205 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 AOC1P19801 751 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 MAGEA11P43364 429 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 GATMP50440 423 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 CCNG1P51959 295 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 WNT3AP56704 352 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 KDELC1Q6UW63 502 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 MIB1Q86YT6 1006 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 SLC25A41Q8N5S1 370 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 SLC43A3Q8NBI5 491 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 IGSF8Q969P0 613 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 PPP1R2P1Q96PQ5 205 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 ZYG11BQ9C0D3 744 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 NT5MQ9NPB1 228 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 ACSS2Q9NR19 701 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 TREX1Q9NSU2 369 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 TMEM161AQ9NX61 479 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 RUVBL2Q9Y230 463 aaKnown RBP13.8□□□□□ -0.2
FOXN4-202ENST00000355216 ANKRD6Q9Y2G4 727 aa13.8□□□□□ -0.2
FOXN4-202ENST00000355216 TRIM13O60858 407 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 SLC35E2BP0CK96 405 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 YWHAQP27348 245 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 NDST2P52849 883 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 MAXP61244 160 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 ZNF460Q14592 562 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 TBCCQ15814 346 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 RASIP1Q5U651 963 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 RSPO2Q6UXX9 243 aaPredicted RBP13.79□□□□□ -0.2
FOXN4-202ENST00000355216 CD99L2Q8TCZ2 262 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 FBXO32Q969P5 355 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 HHIPL1Q96JK4 782 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 ACE2Q9BYF1 805 aaPredicted RBP13.79□□□□□ -0.2
FOXN4-202ENST00000355216 SLC25A51Q9H1U9 297 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 CRISPLD1Q9H336 500 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 MMADHCQ9H3L0 296 aaPredicted RBP13.79□□□□□ -0.2
FOXN4-202ENST00000355216 MRM3Q9HC36 420 aaKnown RBP13.79□□□□□ -0.2
FOXN4-202ENST00000355216 TMEM248Q9NWD8 314 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 OXSMQ9NWU1 459 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 HCSTQ9UBK5 93 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 PLA2G4CQ9UP65 541 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 SORCS3Q9UPU3 1222 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 TTC24A2A3L6 582 aaPredicted RBP13.79□□□□□ -0.2
FOXN4-202ENST00000355216 TK2O00142 265 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 ENPP3O14638 875 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 SIN3BO75182 1162 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 HSPA4LO95757 839 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 HMBSP08397 361 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 GLRBP48167 497 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 RENBPP51606 427 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 SLC10A7Q0GE19 358 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 SEPT6Q14141 434 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 ACSBG2Q5FVE4 666 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 LHX8Q68G74 356 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 FBXL22Q6P050 247 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 CEP97Q8IW35 865 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 PTCD2Q8WV60 388 aaKnown RBP13.79□□□□□ -0.2
FOXN4-202ENST00000355216 KCTD4Q8WVF5 259 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 GATA5Q9BWX5 397 aaPredicted RBP13.79□□□□□ -0.2
FOXN4-202ENST00000355216 COG4Q9H9E3 785 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 STARD7Q9NQZ5 370 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 FNIP2Q9P278 1114 aa13.79□□□□□ -0.2
FOXN4-202ENST00000355216 FAM92AA1XBS5 289 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 SLC1A2P43004 574 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 ITKQ08881 620 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 TAF10Q12962 218 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 SLC12A1Q13621 1099 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 HNRNPDQ14103 355 aaKnown RBP13.78□□□□□ -0.2
FOXN4-202ENST00000355216 IHHQ14623 411 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 GPNMBQ14956 572 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 RAP1GAP2Q684P5 730 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 IMP4Q96G21 291 aaKnown RBP13.78□□□□□ -0.2
FOXN4-202ENST00000355216 CASD1Q96PB1 797 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 CDH19Q9H159 772 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.78□□□□□ -0.2
FOXN4-202ENST00000355216 TMEM114B3SHH9 223 aa13.78□□□□□ -0.2
FOXN4-202ENST00000355216 NBNO60934 754 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms