RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ARMCX3Q9UH62 379 aaPredicted RBP16.22■□□□□ 0.19
DDX55-202ENST00000354291 ACSL6Q9UKU0 697 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 COQ4Q9Y3A0 265 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 COL27A1Q8IZC6 1860 aaPredicted RBP16.22■□□□□ 0.19
DDX55-202ENST00000354291 CLEC18AA5D8T8 446 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 ENO4A6NNW6 628 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 TMX2-CTNND1H3BSU7 103 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 RNF103O00237 685 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 NTN3O00634 580 aaPredicted RBP16.21■□□□□ 0.19
DDX55-202ENST00000354291 PSMA7O14818 248 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 SPINT1O43278 529 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 ANXA6P08133 673 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 PPP1R2P41236 205 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 VASPP50552 380 aaPredicted RBP16.21■□□□□ 0.19
DDX55-202ENST00000354291 OXCT1P55809 520 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 FGL2Q14314 439 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 TMEM259Q4ZIN3 620 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 TPRG1LQ5T0D9 272 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 ESRP1Q6NXG1 681 aaKnown RBP16.21■□□□□ 0.19
DDX55-202ENST00000354291 CLEC18BQ6UXF7 455 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 TAC4Q86UU9 113 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 SH2D3CQ8N5H7 860 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 CLEC18CQ8NCF0 446 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 BTN2A2Q8WVV5 523 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 FAM149B1Q96BN6 582 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 DHTKD1Q96HY7 919 aaPredicted RBP16.21■□□□□ 0.19
DDX55-202ENST00000354291 FEM1CQ96JP0 617 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 FEM1AQ9BSK4 669 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 FUCA2Q9BTY2 467 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 GPR27Q9NS67 375 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 VPS28Q9UK41 221 aa16.21■□□□□ 0.19
DDX55-202ENST00000354291 ICE1Q9Y2F5 2266 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 PRAMEF33A0A0G2JMD5 474 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 FPGTO14772 594 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 PRAMEF10O60809 474 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 MT-CO1P00395 513 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 NOS2P35228 1153 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 PMS1P54277 932 aaKnown RBP16.2■□□□□ 0.18
DDX55-202ENST00000354291 YWHAEP62258 255 aaKnown RBP16.2■□□□□ 0.18
DDX55-202ENST00000354291 RPS21P63220 83 aaKnown RBP16.2■□□□□ 0.18
DDX55-202ENST00000354291 CCL7P80098 99 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 EIF2B5Q13144 721 aaKnown RBP16.2■□□□□ 0.18
DDX55-202ENST00000354291 NNTQ13423 1086 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 CBWD6Q4V339 395 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 ARSIQ5FYB1 569 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 CBWD3Q5JTY5 395 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 CBWD5Q5RIA9 395 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 SYPL2Q5VXT5 272 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 CXorf57Q6NSI4 855 aaKnown RBP16.2■□□□□ 0.18
DDX55-202ENST00000354291 LCLAT1Q6UWP7 414 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 ATP11CQ8NB49 1132 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 TMIEQ8NEW7 156 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 TFAP2BQ92481 460 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 ALG14Q96F25 216 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 BTN2A3PQ96KV6 586 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 CCDC114Q96M63 670 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 ADNPQ9H2P0 1102 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 METTL14Q9HCE5 456 aaKnown RBP16.2■□□□□ 0.18
DDX55-202ENST00000354291 APOBEC3BQ9UH17 382 aaKnown RBP16.2■□□□□ 0.18
DDX55-202ENST00000354291 SLC12A6Q9UHW9 1150 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 KIAA1257Q9ULG3 409 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 LOXL2Q9Y4K0 774 aa16.2■□□□□ 0.18
DDX55-202ENST00000354291 TRPM6Q9BX84 2022 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 TCAF2A6NFQ2 919 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 YY2O15391 372 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 FBXO21O94952 628 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 PRNPP04156 253 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 ITIH1P19827 911 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 CASRP41180 1078 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 KCNAB2Q13303 367 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 SGCGQ13326 291 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 CUL2Q13617 745 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 RABGAP1LQ5R372 815 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 BORAQ6PGQ7 559 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 SDR16C5Q8N3Y7 309 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 ATP6V0D2Q8N8Y2 350 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 CHST14Q8NCH0 376 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 OR52K2Q8NGK3 314 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 OR2A12Q8NGT7 310 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 GRIN3AQ8TCU5 1115 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 JPH3Q8WXH2 748 aaPredicted RBP16.19■□□□□ 0.18
DDX55-202ENST00000354291 CEP63Q96MT8 703 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 HDAC8Q9BY41 377 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 SIRPGQ9P1W8 387 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 RABGEF1Q9UJ41 708 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 DOLKQ9UPQ8 538 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 CENPEQ02224 2701 aa16.19■□□□□ 0.18
DDX55-202ENST00000354291 ZFC3H1O60293 1989 aaKnown RBP16.18■□□□□ 0.18
DDX55-202ENST00000354291 ITPR2Q14571 2701 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 NYNRINQ9P2P1 1898 aaKnown RBP16.18■□□□□ 0.18
DDX55-202ENST00000354291 TRIM49BA6NDI0 452 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 KCNU1A8MYU2 1149 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 LMO7DNF2Z398 122 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 K7ERQ8 282 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 M0QYV0 167 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 RPLP0P05388 317 aaKnown RBP16.18■□□□□ 0.18
DDX55-202ENST00000354291 SRCP12931 536 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 TBXAS1P24557 533 aaPredicted RBP16.18■□□□□ 0.18
DDX55-202ENST00000354291 MAPK10P53779 464 aa16.18■□□□□ 0.18
DDX55-202ENST00000354291 CENPCQ03188 943 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms