RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 DACH2Q96NX9 599 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 DPY30Q9C005 99 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 CACNG4Q9UBN1 327 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 SEC22BO75396 215 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 RPA3P35244 121 aaPredicted RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 ANXA11P50995 505 aaKnown RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 PRKAA2P54646 552 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 PURAQ00577 322 aaKnown RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 SPDYCQ5MJ68 293 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 ING5Q8WYH8 240 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 MAGED4Q96JG8 741 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 EBNA1BP2Q99848 306 aaKnown RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 SEMA4BQ9NPR2 832 aaPredicted RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 SH3BP4Q9P0V3 963 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 CRYBG1Q9Y4K1 1723 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 LTA4HP09960 611 aaKnown RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 OCM2P0CE71 109 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 OCMP0CE72 109 aaPredicted RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 TACR2P21452 398 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 CDK7P50613 346 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 NOMO1Q15155 1222 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 MPPE1Q53F39 396 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 CCDC185Q8N715 623 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 ARNTL2Q8WYA1 636 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 B3GALT6Q96L58 329 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 AHSPQ9NZD4 102 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 ADGRA3Q8IWK6 1321 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 TTPAP49638 278 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 PFKFB4Q16877 469 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 KYAT3Q6YP21 454 aaKnown RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 CENPLQ8N0S6 344 aaPredicted RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 ABHD8Q96I13 439 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 RNF39Q9H2S5 420 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 RWDD3Q9Y3V2 267 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 SNAI1O95863 264 aaPredicted RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 CLTBP09497 229 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 LPOP22079 712 aaPredicted RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 PSMA4P25789 261 aaKnown RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 NUP188Q5SRE5 1749 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 FAM45BPQ6NSW5 357 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 ZNF438Q7Z4V0 828 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 EIF1ADQ8N9N8 165 aaKnown RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 FAM45AQ8TCE6 357 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 ZNF75CPQ92670 426 aaPredicted RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 PIF1Q9H611 641 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 ERVK-5Q9HDB9 667 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 GBE1Q04446 702 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 TAF5Q15542 800 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 PTPRNQ16849 979 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 TAC4Q86UU9 113 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 TMEM139Q8IV31 216 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 ZNF516Q92618 1163 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 VTI1BQ9UEU0 232 aa15.07■□□□□ 0
COL17A1-201ENST00000353479 NOCTQ9UK39 431 aaKnown RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 R3HDM2Q9Y2K5 976 aaKnown RBP15.07■□□□□ 0
COL17A1-201ENST00000353479 CATP04040 527 aaKnown RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 PLOD1Q02809 727 aaPredicted RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 CTBP1Q13363 440 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 PPP1R15BQ5SWA1 713 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 FNIP1Q8TF40 1166 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 GLOD4Q9HC38 313 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 GABRQQ9UN88 632 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 C4BP0C0L5 1744 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 GRM6O15303 877 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 DYRK3O43781 588 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 SASH3O75995 380 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 CALB2P22676 271 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 APLP1P51693 650 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 EIF2B5Q13144 721 aaKnown RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 MED21Q13503 144 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 MTFMTQ96DP5 389 aaKnown RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 FAM124BQ9H5Z6 455 aaPredicted RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 STK39Q9UEW8 545 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 ZNHIT2Q9UHR6 403 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 SNX8Q9Y5X2 465 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 C10orf71Q711Q0 1435 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 ABCB1P08183 1280 aaPredicted RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 CHRNB2P17787 502 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 SOWAHAQ2M3V2 549 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 FAM46CQ5VWP2 391 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 PYROXD2Q8N2H3 581 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 OR8D1Q8WZ84 308 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 AHCYL2Q96HN2 611 aaKnown RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 MYOCQ99972 504 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 AGO3Q9H9G7 860 aaKnown RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 TBC1D14Q9P2M4 693 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 CHKBQ9Y259 395 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 PSMD12O00232 456 aaPredicted RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 TNFRSF8P28908 595 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 CLCN5P51795 746 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 FAM124AQ86V42 546 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 HOMEZQ8IX15 550 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 NKAPQ8N5F7 415 aaKnown RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 STAG3L4Q8TBR4 150 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 HDAC10Q969S8 669 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 GAS2L1Q99501 681 aaPredicted RBP15.06■□□□□ 0
COL17A1-201ENST00000353479 APPL1Q9UKG1 709 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 FGF1P05230 155 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 OTOP3Q7RTS5 596 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 ARL14EPQ8N8R7 260 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms