RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.44■□□□□ 0.86
SIGMAR1-202ENST00000353468 CHFRQ96EP1 664 aa20.44■□□□□ 0.86
SIGMAR1-202ENST00000353468 RPL10LQ96L21 214 aaKnown RBP20.44■□□□□ 0.86
SIGMAR1-202ENST00000353468 GORASP1Q9BQQ3 440 aa20.44■□□□□ 0.86
SIGMAR1-202ENST00000353468 POLR1EQ9GZS1 481 aaKnown RBP20.44■□□□□ 0.86
SIGMAR1-202ENST00000353468 SLC25A51Q9H1U9 297 aa20.44■□□□□ 0.86
SIGMAR1-202ENST00000353468 SLC25A13Q9UJS0 675 aa20.44■□□□□ 0.86
SIGMAR1-202ENST00000353468 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 K7ERQ8 282 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 SMAPO00193 183 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 APRTP07741 180 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 MESP2Q0VG99 397 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 SYCP2LQ5T4T6 812 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 METTL3Q86U44 580 aaKnown RBP20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 PHTF2Q8N3S3 785 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 ATP11CQ8NB49 1132 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 PRCCQ92733 491 aaPredicted RBP20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 MGME1Q9BQP7 344 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 TRPV5Q9NQA5 729 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 SHOC2Q9UQ13 582 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 HS3ST2Q9Y278 367 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 FCF1Q9Y324 198 aaKnown RBP20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 COL4A3Q01955 1670 aa20.43■□□□□ 0.86
SIGMAR1-202ENST00000353468 TPSB2P20231 275 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 HSPA9P38646 679 aaKnown RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 LMAN1P49257 510 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 KDSRQ06136 332 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 BRD3Q15059 726 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 TPSAB1Q15661 275 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 PREPLQ4J6C6 727 aaPredicted RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 NAIF1Q69YI7 327 aaPredicted RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 PDCD7Q8N8D1 485 aaKnown RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 TERB1Q8NA31 727 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 PPP1R2P1Q96PQ5 205 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 CIPCQ9C0C6 399 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 ELOVL2Q9NXB9 296 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 ERVW-1Q9UQF0 538 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 AAR2Q9Y312 384 aaKnown RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 MYO10Q9HD67 2058 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 GOLGA6CA6NDK9 693 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 GOLGA6BA6NDN3 693 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 LOC730098B7Z3J9 87 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 PRRT4C9JH25 899 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 SMAD6O43541 496 aaKnown RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 ANXA9O76027 345 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 TMEM63AO94886 807 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 ASLP04424 464 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 ATP5BP06576 529 aaKnown RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 GOLGA6DP0CG33 693 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 SRCP12931 536 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 SOX9P48436 509 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 STK19P49842 368 aaPredicted RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 DSC2Q02487 901 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 NIPAL4Q0D2K0 466 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 ALG1LQ6GMV1 187 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 KLHDC8BQ8IXV7 354 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 SH2D3CQ8N5H7 860 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 SPATA22Q8NHS9 363 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 ARRDC2Q8TBH0 407 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 IMP4Q96G21 291 aaKnown RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 OXNAD1Q96HP4 312 aaPredicted RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 FMO2Q99518 471 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 SEMA3CQ99985 751 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 MLPHQ9BV36 600 aaPredicted RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 EIF2B3Q9NR50 452 aaKnown RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 GOLGA6AQ9NYA3 693 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 UBP1Q9NZI7 540 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 LHX3Q9UBR4 397 aa20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 MTRF1LQ9UGC7 380 aaKnown RBP20.42■□□□□ 0.86
SIGMAR1-202ENST00000353468 MIA3Q5JRA6 1907 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 TTC24A2A3L6 582 aaPredicted RBP20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 CCDC151A5D8V7 595 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 PSMD3O43242 534 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 TIMM44O43615 452 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 MT-CYBP00156 380 aaPredicted RBP20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 RGRP47804 291 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 GEMP55040 296 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 RHOAP61586 193 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 CDK16Q00536 496 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 NSUN2Q08J23 767 aaKnown RBP eCLIP20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 KCTD11Q693B1 232 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 CYB5D2Q8WUJ1 264 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 SORCS1Q8WY21 1168 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 DNASE1L2Q92874 299 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 RBM15Q96T37 977 aaKnown RBP eCLIP20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 SLCO3A1Q9UIG8 710 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 TICRRQ7Z2Z1 1910 aa20.41■□□□□ 0.86
SIGMAR1-202ENST00000353468 TBC1D3BA6NDS4 549 aa20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 ERI2A8K979 691 aaKnown RBP20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 GOLGA8MH3BSY2 632 aa20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 AP2A1O95782 977 aa20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 MMP2P08253 660 aa20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 DLDP09622 509 aaKnown RBP20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 CR2P20023 1033 aa20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 CES1P23141 567 aa20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 CD86P42081 329 aa20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 EIF4HQ15056 248 aaKnown RBP20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 PRPF39Q86UA1 669 aaKnown RBP20.4■□□□□ 0.86
SIGMAR1-202ENST00000353468 MCUQ8NE86 351 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms