RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ARSAP15289 507 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PGAM1P18669 254 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 MATN1P21941 496 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CYP2F1P24903 491 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 LRPAP1P30533 357 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 LSM3P62310 102 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 OLIG2Q13516 323 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 INPP5AQ14642 412 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 USP10Q14694 798 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 KIF19Q2TAC6 998 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 FSTL4Q6MZW2 842 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PPP4R4Q6NUP7 873 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF534Q76KX8 674 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PIWIL3Q7Z3Z3 882 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 BTLAQ7Z6A9 289 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CDR2LQ86X02 465 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF354CQ86Y25 554 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CADM3Q8N126 398 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SIX5Q8N196 739 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 ZCCHC7Q8N3Z6 543 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 RMDN3Q96TC7 470 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CEP44Q9C0F1 390 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 RAVER2Q9HCJ3 691 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 HMG20AQ9NP66 347 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 VTA1Q9NP79 307 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 COX16Q9P0S2 106 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PCDH10Q9P2E7 1040 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 HESX1Q9UBX0 185 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 FAM198AQ9UFP1 575 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 VPS28Q9UK41 221 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PTBP2Q9UKA9 531 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CDH7Q9ULB5 785 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 OAZ3Q9UMX2 235 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SPDYE2BA6NHP3 402 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 AP3B1O00203 1094 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 EI24O14681 340 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CAPN15O75808 1086 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 BBOX1O75936 387 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 LYPLA2O95372 231 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 TNNC2P02585 160 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PRKCGP05129 697 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SPDYE6P0CI01 402 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 NCAM1P13591 858 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 HNRNPLP14866 589 aaKnown RBP eCLIP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 TGM2P21980 687 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PSMA4P25789 261 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 DCKP27707 260 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SFNP31947 248 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 ARL1P40616 181 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 IFRD2Q12894 506 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF846Q147U1 533 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PHKG1Q16816 387 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 GEN1Q17RS7 908 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SPDYE2Q495Y8 402 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 TIGD2Q4W5G0 525 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SAMD4BQ5PRF9 694 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 GRTP1Q5TC63 336 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PRR5LQ6MZQ0 368 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 HHIPL2Q6UWX4 724 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 EEPD1Q7L9B9 569 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 C14orf80Q86SX3 495 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 RNF135Q8IUD6 432 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PARP8Q8N3A8 854 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PCYOX1LQ8NBM8 494 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 APOL2Q9BQE5 337 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CYP4F12Q9HCS2 524 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SUCOQ9UBS9 1254 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PCDHGA7Q9Y5G6 932 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SRCAPQ6ZRS2 3230 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 BCLAF3A2AJT9 711 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 G3V2L1 256 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CHEK2O96017 543 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SDC4P31431 198 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF132P52740 706 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 PRKCEQ02156 737 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 POU5F1BQ06416 359 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 POLD3Q15054 466 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 MAPRE2Q15555 327 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 KIZQ2M2Z5 673 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 Q3C1V9 767 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF667Q5HYK9 610 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 REP15Q6BDI9 236 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 DCLRE1AQ6PJP8 1040 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SLC4A11Q8NBS3 891 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 OR2T34Q8NGX1 318 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 OR2T3Q8NH03 318 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SLC16A10Q8TF71 515 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 HTRA1Q92743 480 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SLCO4A1Q96BD0 722 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 MASTLQ96GX5 879 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 LGMNQ99538 433 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CPNE1Q99829 537 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 NTPCRQ9BSD7 190 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 C9orf16Q9BUW7 83 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SNRNP25Q9BV90 132 aaKnown RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 HAPLN2Q9GZV7 340 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 SPC25Q9HBM1 224 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 IFT80Q9P2H3 777 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 ATP6AP2A0A1C7CYW4 349 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 DHRS12A0PJE2 317 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms