RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PCDHGC4Q9Y5F7 938 aa13.88□□□□□ -0.19
SMC6-201ENST00000351948 CPSF4O95639 269 aaKnown RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 SLC2A4P14672 509 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 SMARCB1Q12824 385 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 CNSTQ6PJW8 725 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 LDB1Q86U70 411 aaPredicted RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 TNS4Q8IZW8 715 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 VPS37AQ8NEZ2 397 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 OR52K2Q8NGK3 314 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 ELMO1Q92556 727 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 FAM162AQ96A26 154 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 MAGED4Q96JG8 741 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 EBNA1BP2Q99848 306 aaKnown RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 STN1Q9H668 368 aaKnown RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 GLOD4Q9HC38 313 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 MYH14Q7Z406 1995 aaKnown RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 CHD4Q14839 1912 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 KDM1AO60341 852 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 CLDN11O75508 207 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 GPR1P46091 355 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 ALDH9A1P49189 494 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 SLC11A1P49279 550 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 NAGLUP54802 743 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 XRCC4Q13426 336 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 DNAL1Q4LDG9 190 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 TTMPQ5BVD1 217 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 EFL1Q7Z2Z2 1120 aaKnown RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 GALNT4Q8N4A0 578 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 SDCBP2Q9H190 292 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 ARMCX1Q9P291 453 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 DEC1Q9P2X7 70 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 SCOCQ9UIL1 159 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 GPC1P35052 558 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 CDK16Q00536 496 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 TEX44Q53QW1 395 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 ATAT1Q5SQI0 421 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 DNAJC14Q6Y2X3 702 aaPredicted RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 POU5F2Q8N7G0 328 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 COPS7BQ9H9Q2 264 aaPredicted RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 ZNF446Q9NWS9 450 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 TCRBV9S1A1TA0A576 114 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 KCNU1A8MYU2 1149 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 FOXO6A8MYZ6 492 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 CHUKO15111 745 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 ACSL4O60488 711 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 CSF2RAP15509 400 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 EDNRBP24530 442 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 CRABP2P29373 138 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 RPS24P62847 133 aaKnown RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 AGKQ53H12 422 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 LRRC73Q5JTD7 316 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 FUKQ8N0W3 1084 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 METTL6Q8TCB7 284 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 LRRC39Q96DD0 335 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 ZCCHC2Q9C0B9 1178 aaKnown RBP13.87□□□□□ -0.19
SMC6-201ENST00000351948 ACSS2Q9NR19 701 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 KLC4Q9NSK0 619 aa13.87□□□□□ -0.19
SMC6-201ENST00000351948 MEIS3P2A8K0S8 358 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 RAD51BO15315 384 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 ZNF865P0CJ78 1059 aaPredicted RBP13.86□□□□□ -0.19
SMC6-201ENST00000351948 GRK2P25098 689 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 ESRRGP62508 458 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 RASA2Q15283 850 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 KIRREL3Q8IZU9 778 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 MCOLN3Q8TDD5 553 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 PPP1R16AQ96I34 528 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 PRPF18Q99633 342 aaKnown RBP13.86□□□□□ -0.19
SMC6-201ENST00000351948 CCSER2Q9H7U1 834 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 FCF1Q9Y324 198 aaKnown RBP13.86□□□□□ -0.19
SMC6-201ENST00000351948 NHSL1Q5SYE7 1610 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 IL2P60568 153 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 FASTKD3Q14CZ7 662 aaKnown RBP13.86□□□□□ -0.19
SMC6-201ENST00000351948 TXNDC8Q6A555 127 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 C17orf99Q6UX52 265 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 C16orf89Q6UX73 402 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 KCTD4Q8WVF5 259 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 HMCESQ96FZ2 354 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 ZIC5Q96T25 663 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 FLRT1Q9NZU1 646 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 KIAA1522Q9P206 1035 aaPredicted RBP13.86□□□□□ -0.19
SMC6-201ENST00000351948 CNTN3Q9P232 1028 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 PCDHA11Q9Y5I1 949 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 MGAT4DA6NG13 374 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 EVPLLA8MZ36 301 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 LCA5LO95447 670 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 CYP2A7P20853 494 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 GRK3P35626 688 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 FNIP1Q8TF40 1166 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 PSMG2Q969U7 264 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 WARS2Q9UGM6 360 aaKnown RBP13.86□□□□□ -0.19
SMC6-201ENST00000351948 ZNHIT2Q9UHR6 403 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 FAM155BO75949 473 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 ADH1CP00326 375 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 FAM187BQ17R55 369 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 ANKRD22Q5VYY1 191 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 DNAJB7Q7Z6W7 309 aaPredicted RBP13.86□□□□□ -0.19
SMC6-201ENST00000351948 ZNF614Q8N883 585 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 PCDH19Q8TAB3 1148 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 CHRAC1Q9NRG0 131 aa13.86□□□□□ -0.19
SMC6-201ENST00000351948 SERPINE1P05121 402 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms