RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 MAN1C1Q9NR34 630 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 UXTQ9UBK9 157 aaPredicted RBP13.65□□□□□ -0.22
UBA3-201ENST00000349511 LNPEPQ9UIQ6 1025 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 LZTS1Q9Y250 596 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 IRAK3Q9Y616 596 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 NYNRINQ9P2P1 1898 aaKnown RBP13.65□□□□□ -0.22
UBA3-201ENST00000349511 IQANK1A0A1B0GTG1 560 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 ZBTB24O43167 697 aaPredicted RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 ACSL4O60488 711 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 TPBGLP0DKB5 382 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 MX2P20592 715 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 CDC25CP30307 473 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 PAPOLAP51003 745 aaKnown RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 SGSHP51688 502 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 RPS24P62847 133 aaKnown RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 SMAD3P84022 425 aaKnown RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 TAF11Q15544 211 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 PPM1LQ5SGD2 360 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 CCDC149Q6ZUS6 474 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 TMC8Q8IU68 726 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 ATPAF2Q8N5M1 289 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 TTC8Q8TAM2 541 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 BHMTQ93088 406 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 SERAC1Q96JX3 654 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 NOL6Q9H6R4 1146 aaKnown RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 TLE6Q9H808 572 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 UBP1Q9NZI7 540 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 OBSL1O75147 1896 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 A0A0G2JND7 137 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 NCAM2O15394 837 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 STK10O94804 968 aaKnown RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 CKMP06732 381 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 CCR2P41597 374 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 NEK3P51956 506 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 KPNA1P52294 538 aaPredicted RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 ZNF419Q96HQ0 510 aaPredicted RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 NUDCD1Q96RS6 583 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 FERMT1Q9BQL6 677 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 TSSK1BQ9BXA7 367 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 KLF16Q9BXK1 252 aaPredicted RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 TRIM55Q9BYV6 548 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 DENND2DQ9H6A0 471 aaPredicted RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 HEY2Q9UBP5 337 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 AGO1Q9UL18 857 aaKnown RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 CPQQ9Y646 472 aa13.64□□□□□ -0.23
UBA3-201ENST00000349511 ZFP37Q9Y6Q3 630 aaPredicted RBP13.64□□□□□ -0.23
UBA3-201ENST00000349511 TCRBV9S1A1TA0A576 114 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 F5H5T6 163 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 CHADO15335 359 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 MAFKO60675 156 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 HNRNPCL1O60812 293 aaKnown RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 DHRS4L1P0CG22 281 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 RHOQP17081 205 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 OR1E1P30953 314 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 ETV4P43268 484 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 SLC11A2P49281 568 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 ARFIP2P53365 341 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 NRG1Q02297 640 aaPredicted RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 GPM6BQ13491 265 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 KBTBD12Q3ZCT8 623 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 KLHDC10Q6PID8 442 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 ELMOD1Q8N336 334 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 ENDOVQ8N8Q3 282 aaKnown RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 SLC44A1Q8WWI5 657 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 TCEAL4Q96EI5 215 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 HMCESQ96FZ2 354 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 APOPT1Q96IL0 206 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 MIPEPQ99797 713 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 LRRC3Q9BY71 257 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 RWDD3Q9Y3V2 267 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 TEX264Q9Y6I9 313 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 MTCL1Q9Y4B5 1905 aaKnown RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 TNRC18O15417 2968 aaPredicted RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 IGLV3-10A0A075B6K4 115 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 C5orf67F2Z3F1 127 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 J3KR12 359 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 USP12O75317 370 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 PAX7P23759 505 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 CD68P34810 354 aaPredicted RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 NTHL1P78549 312 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 SLC18A2Q05940 514 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 PABPC1LQ4VXU2 614 aaKnown RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 TEX44Q53QW1 395 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 SH2D5Q6ZV89 423 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 OTOP3Q7RTS5 596 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 ADGRD2Q7Z7M1 963 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 ARNTL2Q8WYA1 636 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 MRPS31Q92665 395 aaKnown RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 TTC17Q96AE7 1141 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 NAF1Q96HR8 494 aaKnown RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 ANKRD27Q96NW4 1050 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 FAM111AQ96PZ2 611 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 TRIM56Q9BRZ2 755 aaKnown RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 PBX4Q9BYU1 374 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 KCNK13Q9HB14 408 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 ARL8BQ9NVJ2 186 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 TMEM248Q9NWD8 314 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms