RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 RARRES1P49788 294 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 SPIRE1Q08AE8 756 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 GRIK5Q16478 980 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 NFIL3Q16649 462 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 UGT3A1Q6NUS8 523 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 PSKH2Q96QS6 385 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 C9orf16Q9BUW7 83 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 VPS33BQ9H267 617 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 MKLN1Q9UL63 735 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 KIAA1257Q9ULG3 409 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 CHKBQ9Y259 395 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 CDY2AQ9Y6F7 541 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 MAP2P11137 1827 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 SDR42E2A6NKP2 422 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 SMIM22K7EJ46 135 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM20BO75063 409 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 MICAL2O94851 1124 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 RPL35P42766 123 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 ERVK-9P63128 1117 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 ACVR2BQ13705 512 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 TIGD7Q6NT04 549 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 ERAP2Q6P179 960 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 OTOP1Q7RTM1 612 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 KRT78Q8N1N4 520 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 SLC9A6Q92581 669 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 COPS5Q92905 334 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 RAD18Q9NS91 495 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 NUDT5Q9UKK9 219 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 ITGA11Q9UKX5 1188 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 CDY1Q9Y6F8 540 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 F9P00740 461 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 CALCAP01258 141 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 IL6P05231 212 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 TPBGLP0DKB5 382 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 PIK3R1P27986 724 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 OR2B6P58173 313 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 RPL26P61254 145 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 POU5F1Q01860 360 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 STRA8Q7Z7C7 330 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 GPC2Q8N158 579 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 SSX3Q99909 188 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 KIFC1Q9BW19 673 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 DCLK3Q9C098 648 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 NUAK2Q9H093 628 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 CATSPERZQ9NTU4 200 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 NWD1Q149M9 1564 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 NKRFO15226 690 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 VPS26AO75436 327 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 PCDH8O95206 1070 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 SNAP29O95721 258 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 BTG3Q14201 252 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 TTLL9Q3SXZ7 439 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 PDPK2PQ6A1A2 396 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF425Q6IV72 752 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 BHLHB9Q6PI77 547 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 C12orf56Q8IXR9 622 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 LPCAT1Q8NF37 534 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 CKAP2Q8WWK9 683 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 PNMA5Q96PV4 448 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 SNX7Q9UNH6 387 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 KANSL1LA0AUZ9 987 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 A8MX80 341 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 TK2O00142 265 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 TM9SF1O15321 606 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 TPST1O60507 370 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 IFNA7P01567 189 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 ADSSP30520 456 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 CCT8P50990 548 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 PPATQ06203 517 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 BMPR2Q13873 1038 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 NFYCQ13952 458 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 FSCN1Q16658 493 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 PGS1Q32NB8 556 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 HERC6Q8IVU3 1022 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 PHACTR4Q8IZ21 702 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 COLGALT1Q8NBJ5 622 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 FERD3LQ96RJ6 166 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 THUMPD3Q9BV44 507 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 PIGUQ9H490 435 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 TLR8Q9NR97 1041 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 SNCAIPQ9Y6H5 919 aa11.21□□□□□ -0.61
SMARCE1-202ENST00000348513 H2AFYO75367 372 aaKnown RBP11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 ALDH1A2O94788 518 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 SEMA3AQ14563 771 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 POU6F1Q14863 301 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 STK11Q15831 433 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 OTOAQ7RTW8 1153 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 RD3Q7Z3Z2 195 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 TIGD4Q8IY51 512 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 PIK3R3Q92569 461 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 LACRTQ9GZZ8 138 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 PDGFCQ9NRA1 345 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 ARMC1Q9NVT9 282 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 ARHGAP20Q9P2F6 1191 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 SALL1Q9NSC2 1324 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 AGRPO00253 132 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 KMOO15229 486 aa11.21□□□□□ -0.62
SMARCE1-202ENST00000348513 CPNE3O75131 537 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms